RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 NCDNQ9UBB6 729 aa4.47□□□□□ -1.69
TARDBP-220ENST00000618606 GAAP10253 952 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 GNAT2P19087 354 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 SDSP20132 328 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 SQSTM1Q13501 440 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 PLEKHG4Q58EX7 1191 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 PIK3R6Q5UE93 754 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 CDCA2Q69YH5 1023 aaPredicted RBP4.46□□□□□ -1.7
TARDBP-220ENST00000618606 UBE2R2Q712K3 238 aaPredicted RBP4.46□□□□□ -1.7
TARDBP-220ENST00000618606 RD3Q7Z3Z2 195 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 ZZZ3Q8IYH5 903 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 PDCD2LQ9BRP1 358 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 MYL10Q9BUA6 226 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 R3HDMLQ9H3Y0 253 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 CYP4F11Q9HBI6 524 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 ING3Q9NXR8 418 aa4.46□□□□□ -1.7
TARDBP-220ENST00000618606 RFPL3O75679 317 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
TARDBP-220ENST00000618606 FLT3P36888 993 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
TARDBP-220ENST00000618606 CXorf67Q86X51 503 aaPredicted RBP4.45□□□□□ -1.7
TARDBP-220ENST00000618606 C7orf31Q8N865 590 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 PMFBP1Q8TBY8 1022 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 HIST1H2AHQ96KK5 128 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 HIST1H2AJQ99878 128 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 NOL10Q9BSC4 688 aaKnown RBP4.45□□□□□ -1.7
TARDBP-220ENST00000618606 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 OXSMQ9NWU1 459 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 SORCS3Q9UPU3 1222 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 MYPNQ86TC9 1320 aa4.45□□□□□ -1.7
TARDBP-220ENST00000618606 PROB1E7EW31 1015 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 TRIM24O15164 1050 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 JMJD7P0C870 316 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 HK1P19367 917 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 LRRC32Q14392 662 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 CFAP100Q494V2 611 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 TIGD2Q4W5G0 525 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 ZNF362Q5T0B9 420 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-220ENST00000618606 Q6YL49 198 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 KIF18BQ86Y91 864 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 UNC5BQ8IZJ1 945 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 PIK3C3Q8NEB9 887 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 CPT1CQ8TCG5 803 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 RTF1Q92541 710 aaKnown RBP4.44□□□□□ -1.7
TARDBP-220ENST00000618606 POFUT1Q9H488 388 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
TARDBP-220ENST00000618606 CDK11AQ9UQ88 783 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-220ENST00000618606 AHRRA9YTQ3 701 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 ELL2O00472 640 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 NRP1O14786 923 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 PPP1R12AO14974 1030 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 RECQL4O94761 1208 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 ALDH1A2O94788 518 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 APOL3O95236 402 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 ATP2A2P16615 1042 aaKnown RBP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 PTTG1IPP53801 180 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 CD69Q07108 199 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 MRPL49Q13405 166 aaKnown RBP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 FAM214AQ32MH5 1076 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 IQSEC1Q6DN90 963 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 MICALCLQ6ZW33 695 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 OR52N2Q8NGI0 321 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 CPPED1Q9BRF8 314 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 OSBPL2Q9H1P3 480 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 KCNH6Q9H252 994 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 TOMM22Q9NS69 142 aa4.43□□□□□ -1.7
TARDBP-220ENST00000618606 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.43□□□□□ -1.7
TARDBP-220ENST00000618606 ARHGEF17Q96PE2 2063 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 F2P00734 622 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 CFBP00751 764 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 ZEB1P37275 1124 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 VPS72Q15906 364 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 LCE1AQ5T7P2 110 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 FBXO42Q6P3S6 717 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 DOK3Q7L591 496 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 TAS1R1Q7RTX1 841 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 GLB1L3Q8NCI6 653 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 MYEOVQ96EZ4 313 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 NDC1Q9BTX1 674 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 LSM14BQ9BX40 385 aaKnown RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 ZNF768Q9H5H4 540 aaKnown RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 KANSL2Q9H9L4 492 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 INTS7Q9NVH2 962 aaKnown RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 IFT57Q9NWB7 429 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 H2AFY2Q9P0M6 372 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 MAGEC2Q9UBF1 373 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-220ENST00000618606 ZKSCAN5Q9Y2L8 839 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 SPATA31A6Q5VVP1 1343 aa4.42□□□□□ -1.7
TARDBP-220ENST00000618606 CENPVL1A0A0U1RR11 272 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 DNAJC6O75061 913 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 SEC24DO94855 1032 aaPredicted RBP4.41□□□□□ -1.7
TARDBP-220ENST00000618606 LY86O95711 162 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 GYPEP15421 78 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 LAG3P18627 525 aa4.41□□□□□ -1.7
TARDBP-220ENST00000618606 CD40P25942 277 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms