RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 UBXN11Q5T124 520 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 PGBD4Q96DM1 585 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 CPB2Q96IY4 423 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 ENTPD7Q9NQZ7 604 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 DBR1Q9UK59 544 aaKnown RBP24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 LZTS1Q9Y250 596 aa24.51■■□□□ 1.51
SYNGR3-206ENST00000618464 FSCN2O14926 492 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 OFD1O75665 1012 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 CCT6AP40227 531 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 KRT17Q04695 432 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 PTGDRQ13258 359 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 AGMOQ6ZNB7 445 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 SLC39A11Q8N1S5 342 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 EFHBQ8N7U6 833 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 TCF25Q9BQ70 676 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 GBP3Q9H0R5 595 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 TBC1D13Q9NVG8 400 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 CD207Q9UJ71 328 aa24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 ARIH1Q9Y4X5 557 aaPredicted RBP24.5■■□□□ 1.51
SYNGR3-206ENST00000618464 ARHGEF35A5YM69 484 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 LRRIQ4A6NIV6 560 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 PRR33A8MZF0 331 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 DCXO43602 365 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 ALDH7A1P49419 539 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 MCM2P49736 904 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 FXR2P51116 673 aaKnown RBP eCLIP24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 RNASELQ05823 741 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 MBTD1Q05BQ5 628 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 SMAD4Q13485 552 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 HAUS3Q68CZ6 603 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 MSLNLQ96KJ4 702 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 EIF2AQ9BY44 585 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 NRDE2Q9H7Z3 1164 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 CLEC1BQ9P126 229 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 LRWD1Q9UFC0 647 aa24.49■■□□□ 1.51
SYNGR3-206ENST00000618464 H3BQV1 296 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 GLP2RO95838 553 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 RBM10P98175 930 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 ECM1Q16610 540 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 PDE12Q6L8Q7 609 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 PADI6Q6TGC4 694 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 MRPL10Q7Z7H8 261 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 IFNLR1Q8IU57 520 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 MCPH1Q8NEM0 835 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 URGCPQ8TCY9 931 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 RSAD1Q9HA92 442 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 BARX2Q9UMQ3 279 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 SMC3Q9UQE7 1217 aa24.48■■□□□ 1.51
SYNGR3-206ENST00000618464 B4GALT5O43286 388 aa24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 AFF1P51825 1210 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 POU5F1BQ06416 359 aa24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 NCBP1Q09161 790 aaKnown RBP24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 NOTUMQ6P988 496 aa24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 TMC7Q7Z402 723 aa24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 TMEM173Q86WV6 379 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 DNAJB4Q9UDY4 337 aa24.47■■□□□ 1.51
SYNGR3-206ENST00000618464 HIDE1A8MVS5 230 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 ARF4P18085 180 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 NCLP19338 710 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 AXLP30530 894 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 CA8P35219 290 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 PCBP1Q15365 356 aaKnown RBP eCLIP24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 AMHR2Q16671 573 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 DUSP6Q16828 381 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 CDR2LQ86X02 465 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 SMG8Q8ND04 991 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 VN1R2Q8NFZ6 395 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 SNX29Q8TEQ0 813 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 RSPH1Q8WYR4 309 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 TMEM169Q96HH4 297 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 APOL6Q9BWW8 343 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 CSRNP2Q9H175 543 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 HES2Q9Y543 173 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 IPPQ9Y573 584 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
SYNGR3-206ENST00000618464 CNTNAP2Q9UHC6 1331 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 PP2D1A8MPX8 630 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 B4GALT3O60512 393 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 EYA4O95677 639 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 POMCP01189 267 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 ITGA4P13612 1032 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 IL17AQ16552 155 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 ZNF280BQ86YH2 543 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 BSNDQ8WZ55 320 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 CCDC51Q96ER9 411 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 NFKBIZQ9BYH8 718 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 RAB34Q9BZG1 259 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 RNF39Q9H2S5 420 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 POLD4Q9HCU8 107 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 NGRNQ9NPE2 291 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 DDX19AQ9NUU7 478 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 KIAA1024Q9UPX6 916 aa24.45■■□□□ 1.5
SYNGR3-206ENST00000618464 GALTP07902 379 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 CYP11B2P19099 503 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 SLC11A1P49279 550 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 PDIA5Q14554 519 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 LLGL2Q6P1M3 1020 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 IGSF22Q8N9C0 903 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 BCL7CQ8WUZ0 217 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms