RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PIPSLA2A3N6 862 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 FAM47DPA6NHR8 397 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 IL6P05231 212 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 CYP27A1Q02318 531 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 DHX34Q14147 1143 aaKnown RBP15.89■□□□□ 0.14
COL5A1-208ENST00000618395 SPANXN2Q5MJ10 180 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 UNC45BQ8IWX7 931 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 BBS5Q8N3I7 341 aa15.89■□□□□ 0.14
COL5A1-208ENST00000618395 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.14
COL5A1-208ENST00000618395 AXIN1O15169 862 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 PPARGP37231 505 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-208ENST00000618395 TTC8Q8TAM2 541 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 RMDN1Q96DB5 314 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 CHID1Q9BWS9 393 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 GPCPD1Q9NPB8 672 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 TNFAIP8O95379 198 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 ATP6V1G2O95670 118 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 TARSP26639 723 aaKnown RBP15.89■□□□□ 0.13
COL5A1-208ENST00000618395 NME9Q86XW9 330 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 OSBPL10Q9BXB5 764 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 RGS2P41220 211 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 STK4Q13043 487 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 TMEM161AQ9NX61 479 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 PTGDRQ13258 359 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 CLIC6Q96NY7 704 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 MED10Q9BTT4 135 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 FAM187AA6NFU0 413 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 ABCB1P08183 1280 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-208ENST00000618395 AKAP5P24588 427 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 HSPA2P54652 639 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 COX10Q12887 443 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 STAT4Q14765 748 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 PRUNE1Q86TP1 453 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 F8W8V4 182 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 GPAA1O43292 621 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 JAK1P23458 1154 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 PSMA4P25789 261 aaKnown RBP15.89■□□□□ 0.13
COL5A1-208ENST00000618395 PTPN12Q05209 780 aaKnown RBP15.89■□□□□ 0.13
COL5A1-208ENST00000618395 MAPK11Q15759 364 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 APPBP2Q92624 585 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 EXT2Q93063 718 aa15.89■□□□□ 0.13
COL5A1-208ENST00000618395 K7ENM7 598 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 BCAP31P51572 246 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 OASLQ15646 514 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SKA1Q96BD8 255 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 FAM32AQ9Y421 112 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 E7EWF7 191 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 LAD1O00515 517 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 RAD51BO15315 384 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 CDH3P22223 829 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 OLR1P78380 273 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 TCAIMQ8N3R3 496 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 AFAP1Q8N556 730 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 H0YCG3 227 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 GGPS1O95749 300 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 GSTT1P30711 240 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SOX5P35711 763 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 EPS8Q12929 822 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 DNAJC24Q6P3W2 148 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 INPP5FQ9Y2H2 1132 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 CCDC162PA2VCL2 907 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 H7C0S8 307 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ATP9AO75110 1047 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 GFPT2O94808 682 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PTGS2P35354 604 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PSMC2P35998 433 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SETD3Q86TU7 594 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 NT5C1BQ96P26 610 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 CYLDQ9NQC7 956 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 MBD4O95243 580 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ITGAXP20702 1163 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ZSWIM6Q9HCJ5 1215 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 RFC4P35249 363 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PDCD6IPQ8WUM4 868 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 WBP11Q9Y2W2 641 aaKnown RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ZBTB7BO15156 539 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 LIG4P49917 911 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PPP4R4Q6NUP7 873 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SMYD4Q8IYR2 804 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 SPATA4Q8NEY3 305 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 JARID2Q92833 1246 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-208ENST00000618395 MAGED4Q96JG8 741 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 PDLIM2Q96JY6 352 aa15.88■□□□□ 0.13
COL5A1-208ENST00000618395 ZNF862O60290 1169 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 MMRN1Q13201 1228 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 NUP93Q8N1F7 819 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 SLC17A8Q8NDX2 589 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 AIPL1Q9NZN9 384 aa15.87■□□□□ 0.13
COL5A1-208ENST00000618395 UBA2Q9UBT2 640 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms