RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 HVCN1Q96D96 273 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 LRRC4Q9HBW1 653 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 SUPT20HL2P0C7V6 817 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 ALDH3A1P30838 453 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 ARMCX2Q7L311 632 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 RNF10Q8N5U6 811 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 CFAP57Q96MR6 1250 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 PNMA5Q96PV4 448 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 APEX2Q9UBZ4 518 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 PASKQ96RG2 1323 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 GYPCP04921 128 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 ACTN1P12814 892 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 PSMC6P62333 389 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 SREBF2Q12772 1141 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 TTI2Q6NXR4 508 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 HAUS1Q96CS2 278 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 ANO9A1A5B4 782 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 CDC42EP1Q00587 391 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 C2orf54Q08AI8 447 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 KYAT1Q16773 422 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 MUM1L1Q5H9M0 696 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 DENND2CQ68D51 928 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 SLC51AQ86UW1 340 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 MTMR9Q96QG7 549 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 GPRC5CQ9NQ84 441 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 AGPAT3Q9NRZ7 376 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 NKIRAS1Q9NYS0 192 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 HSPA6P17066 643 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 KCNJ6P48051 423 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 SEPT6Q14141 434 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 EFCAB12Q6NXP0 572 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 OTOP1Q7RTM1 612 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 MEIS2O14770 477 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 CYP3A4P08684 503 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 SARSP49591 514 aaKnown RBP14.89□□□□□ -0.03
CIITA-213ENST00000618327 KRT71Q3SY84 523 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 PLEKHH3Q7Z736 793 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 C4orf19Q8IY42 314 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 ERGIC2Q96RQ1 377 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 KIFC3Q9BVG8 833 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 STK33Q9BYT3 514 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 ASCC2Q9H1I8 757 aaPredicted RBP14.89□□□□□ -0.03
CIITA-213ENST00000618327 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
CIITA-213ENST00000618327 HEXIM1O94992 359 aaKnown RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 SLC9A1P19634 815 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 CTNNA1P35221 906 aaKnown RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 PCK1P35558 622 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 NT5DC1Q5TFE4 455 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 E4F1Q66K89 784 aaPredicted RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 BTNL9Q6UXG8 535 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 PDZD4Q76G19 769 aaPredicted RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 NIPA1Q7RTP0 329 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 RAET1EQ8TD07 263 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 NSMCE1Q8WV22 266 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 SLC5A5Q92911 643 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 TBX20Q9UMR3 447 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 LPXNO60711 386 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 FTLP02792 175 aaPredicted RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 KRT1P04264 644 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 GNA15P30679 374 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 MAN1A1P33908 653 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 CLNS1AP54105 237 aaKnown RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 DGKDQ16760 1214 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 SGO2Q562F6 1265 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 WDR18Q9BV38 432 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 KATNAL1Q9BW62 490 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 RRAGCQ9HB90 399 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 ANAPC7Q9UJX3 599 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 PTPN22Q9Y2R2 807 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 DOT1LQ8TEK3 1739 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 VGLL3A8MV65 326 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 SHROOM1Q2M3G4 852 aaPredicted RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 CENPPQ6IPU0 288 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 FBXO16Q8IX29 292 aaPredicted RBP14.88□□□□□ -0.03
CIITA-213ENST00000618327 ACAP3Q96P50 834 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 DAAM1Q9Y4D1 1078 aa14.88□□□□□ -0.03
CIITA-213ENST00000618327 HUS1O60921 280 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 ATF2P15336 505 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 TMEM119Q4V9L6 283 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 STMN2Q93045 179 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 CABS1Q96KC9 395 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 C11orf70Q9BRQ4 267 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 PDGFDQ9GZP0 370 aaPredicted RBP14.87□□□□□ -0.03
CIITA-213ENST00000618327 SEMA6BQ9H3T3 888 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.87□□□□□ -0.03
CIITA-213ENST00000618327 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 FAM237AA0A1B0GTK4 181 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 LMNB2Q03252 620 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 RFX6Q8HWS3 928 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 INPP5FQ9Y2H2 1132 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 SSU72P8A0A1W2PR75 194 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 PDHXO00330 501 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 ZMYND10O75800 440 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 SNHG28P0DPA3 235 aa14.87□□□□□ -0.03
CIITA-213ENST00000618327 ARHGAP25P42331 645 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms