RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 HCSTQ9UBK5 93 aa27.52■■■□□ 2
PMS1-220ENST00000618056 ITGB1P05556 798 aa27.51■■■□□ 2
PMS1-220ENST00000618056 COLGALT1Q8NBJ5 622 aa27.51■■■□□ 2
PMS1-220ENST00000618056 USP28Q96RU2 1077 aa27.51■■■□□ 2
PMS1-220ENST00000618056 CSRNP2Q9H175 543 aa27.51■■■□□ 2
PMS1-220ENST00000618056 NCOR1O75376 2440 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 CNTNAP2Q9UHC6 1331 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 A0A1B0GUA9 196 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 MEIS3P2A8K0S8 358 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 B4GALT5O43286 388 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 NCLP19338 710 aaKnown RBP27.51■■□□□ 1.99
PMS1-220ENST00000618056 GUCY2CP25092 1073 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 SLC12A3P55017 1021 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 GLB1LQ6UWU2 654 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 DAW1Q8N136 415 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 DEPTORQ8TB45 409 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 SPPL3Q8TCT6 385 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 CPB2Q96IY4 423 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 PLIN2Q99541 437 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 CCDC113Q9H0I3 377 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 POLD4Q9HCU8 107 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 ALG13Q9NP73 1137 aaKnown RBP27.51■■□□□ 1.99
PMS1-220ENST00000618056 KCND2Q9NZV8 630 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 THEGQ9P2T0 379 aa27.51■■□□□ 1.99
PMS1-220ENST00000618056 FBXO2Q9UK22 296 aaPredicted RBP27.51■■□□□ 1.99
PMS1-220ENST00000618056 SRPRBQ9Y5M8 271 aaKnown RBP27.51■■□□□ 1.99
PMS1-220ENST00000618056 TDRD15B5MCY1 1934 aaKnown RBP27.5■■□□□ 1.99
PMS1-220ENST00000618056 MARCKSP29966 332 aaPredicted RBP27.5■■□□□ 1.99
PMS1-220ENST00000618056 EFNA5P52803 228 aa27.5■■□□□ 1.99
PMS1-220ENST00000618056 AGMOQ6ZNB7 445 aa27.5■■□□□ 1.99
PMS1-220ENST00000618056 SMG8Q8ND04 991 aaKnown RBP27.5■■□□□ 1.99
PMS1-220ENST00000618056 DRC1Q96MC2 740 aa27.5■■□□□ 1.99
PMS1-220ENST00000618056 EIF2AQ9BY44 585 aaKnown RBP27.5■■□□□ 1.99
PMS1-220ENST00000618056 CCSER1Q9C0I3 900 aa27.5■■□□□ 1.99
PMS1-220ENST00000618056 C17orf75Q9HAS0 396 aa27.5■■□□□ 1.99
PMS1-220ENST00000618056 HIP1RO75146 1068 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 OFD1O75665 1012 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 PLA2G4BP0C869 781 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 MAPK7Q13164 816 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 CAMK1Q14012 370 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 SLC39A14Q15043 492 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 SKIV2LQ15477 1246 aaKnown RBP27.49■■□□□ 1.99
PMS1-220ENST00000618056 MAPK6Q16659 721 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 IPPQ9Y573 584 aa27.49■■□□□ 1.99
PMS1-220ENST00000618056 TTC28Q96AY4 2481 aa27.48■■□□□ 1.99
PMS1-220ENST00000618056 NASPP49321 788 aaPredicted RBP27.48■■□□□ 1.99
PMS1-220ENST00000618056 CEBPZQ03701 1054 aaKnown RBP27.48■■□□□ 1.99
PMS1-220ENST00000618056 UBE3AQ05086 875 aa27.48■■□□□ 1.99
PMS1-220ENST00000618056 LONRF3Q496Y0 759 aa27.48■■□□□ 1.99
PMS1-220ENST00000618056 SLC27A1Q6PCB7 646 aa27.48■■□□□ 1.99
PMS1-220ENST00000618056 ATXN2LQ8WWM7 1075 aaKnown RBP27.48■■□□□ 1.99
PMS1-220ENST00000618056 NSUN3Q9H649 340 aaKnown RBP27.48■■□□□ 1.99
PMS1-220ENST00000618056 COG5Q9UP83 839 aa27.48■■□□□ 1.99
PMS1-220ENST00000618056 PRKCBP05771 671 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 ZSCAN22P10073 491 aaPredicted RBP27.47■■□□□ 1.99
PMS1-220ENST00000618056 NOMO2Q5JPE7 1267 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 KCNT2Q6UVM3 1135 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 ZNF558Q96NG5 402 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 RSAD1Q9HA92 442 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 UBN1Q9NPG3 1134 aa27.47■■□□□ 1.99
PMS1-220ENST00000618056 DAXXQ9UER7 740 aaPredicted RBP27.47■■□□□ 1.99
PMS1-220ENST00000618056 ACKR2O00590 384 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 FGF18O76093 207 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 SSBP05455 408 aaKnown RBP eCLIP27.46■■□□□ 1.99
PMS1-220ENST00000618056 PLCG1P19174 1290 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 DNAJB1P25685 340 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 PPM1AP35813 382 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 NPTX2P47972 431 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 KARSQ15046 597 aaKnown RBP27.46■■□□□ 1.99
PMS1-220ENST00000618056 THNSL1Q8IYQ7 743 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 POF1BQ8WVV4 589 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 KIFC3Q9BVG8 833 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 TRIM6Q9C030 488 aaPredicted RBP27.46■■□□□ 1.99
PMS1-220ENST00000618056 BLOC1S4Q9NUP1 217 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 TBC1D13Q9NVG8 400 aa27.46■■□□□ 1.99
PMS1-220ENST00000618056 CARNS1A5YM72 827 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 ITGA4P13612 1032 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 PEX3P56589 373 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 PLCB3Q01970 1234 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 DMP1Q13316 513 aaPredicted RBP27.45■■□□□ 1.99
PMS1-220ENST00000618056 PRPF4BQ13523 1007 aaKnown RBP27.45■■□□□ 1.99
PMS1-220ENST00000618056 LRRC15Q8TF66 581 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 EPSTI1Q96J88 318 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 ZNF396Q96N95 335 aaPredicted RBP27.45■■□□□ 1.99
PMS1-220ENST00000618056 KCNG1Q9UIX4 513 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 LZTS1Q9Y250 596 aa27.45■■□□□ 1.99
PMS1-220ENST00000618056 INPPL1O15357 1258 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 USP49Q70CQ1 688 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 HACE1Q8IYU2 909 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 KRI1Q8N9T8 703 aaKnown RBP27.44■■□□□ 1.98
PMS1-220ENST00000618056 LINC00301Q8NCQ3 95 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 RASSF8Q8NHQ8 419 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 URGCPQ8TCY9 931 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 NTPCRQ9BSD7 190 aaKnown RBP27.44■■□□□ 1.98
PMS1-220ENST00000618056 ARHGAP28Q9P2N2 729 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 KANSL3Q9P2N6 904 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 INPP5FQ9Y2H2 1132 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 PHLPP2Q6ZVD8 1323 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 ZMYM2Q9UBW7 1377 aa27.44■■□□□ 1.98
PMS1-220ENST00000618056 TTLL13PA6NNM8 815 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms