RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PRDM5Q9NQX1 630 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 AGPAT3Q9NRZ7 376 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 INTS13Q9NVM9 706 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 TBX20Q9UMR3 447 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 LUC7L2Q9Y383 392 aaKnown RBP18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 Q9Y3F1 56 aa18.34■□□□□ 0.53
TRAPPC3-210ENST00000617904 MYH9P35579 1960 aaKnown RBP18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 TMEM150BA6NC51 233 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRIM43BA6NCK2 446 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 DLL1O00548 723 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 MAPK13O15264 365 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 ZNF500O60304 480 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 PGK1P00558 417 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 PBX1P40424 430 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 CPT1AP50416 773 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 PLCB4Q15147 1175 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 SHHQ15465 462 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 TARBP2Q15633 366 aaKnown RBP18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 SLFN12LQ6IEE8 588 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRIM59Q8IWR1 403 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 NEK11Q8NG66 645 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 BADQ92934 168 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 TRIM43Q96BQ3 446 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 FIZ1Q96SL8 496 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 PCYT2Q99447 389 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 SH2D3AQ9BRG2 576 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 EDEM3Q9BZQ6 932 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 POLD4Q9HCU8 107 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 GPRC5CQ9NQ84 441 aa18.33■□□□□ 0.53
TRAPPC3-210ENST00000617904 LRRIQ4A6NIV6 560 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 CLIC2O15247 247 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 ARHGAP6O43182 974 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 N4BP1O75113 896 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 LGALS2P05162 132 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 AKR1A1P14550 325 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 ATP4AP20648 1035 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 MARK3P27448 753 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 TLE2Q04725 743 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 SYCP1Q15431 976 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 C9orf50Q5SZB4 431 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 TCERG1LQ5VWI1 586 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 INTS8Q75QN2 995 aaKnown RBP18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 RNF180Q86T96 592 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 TMEM161BQ8NDZ6 487 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 AFG1LQ8WV93 481 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 COPS5Q92905 334 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 KCNN1Q92952 543 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 LENG1Q96BZ8 264 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 ZNF830Q96NB3 372 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 BAG1Q99933 345 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 KATNBL1Q9H079 304 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 SPC25Q9HBM1 224 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 DAAM1Q9Y4D1 1078 aa18.32■□□□□ 0.52
TRAPPC3-210ENST00000617904 MYH11P35749 1972 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 A0A1W2PQJ5 194 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 RRN3P2A6NIE6 340 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 K7ERI5 159 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 TGFB1I1O43294 461 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 ZSCAN12O43309 604 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 KPNA6O60684 536 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 ADAMTS4O75173 837 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 ARL2P36404 184 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 LIG4P49917 911 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 CYP2J2P51589 502 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 CDC42EP1Q00587 391 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 EEF2KMTQ96G04 330 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 TMEM134Q9H6X4 195 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 ARID2Q68CP9 1835 aa18.31■□□□□ 0.52
TRAPPC3-210ENST00000617904 MFAP3LO75121 409 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 LDHAP00338 332 aaKnown RBP18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 ITGB8P26012 769 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 HOXD13P35453 343 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 RBL2Q08999 1139 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 CPLX3Q8WVH0 158 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 TMEM143Q96AN5 459 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 KATNAL1Q9BW62 490 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 CAPN11Q9UMQ6 739 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 ZMYM2Q9UBW7 1377 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 DOCK5Q9H7D0 1870 aa18.3■□□□□ 0.52
TRAPPC3-210ENST00000617904 A0A1W2PQ45 241 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 A0A1W2PQY0 241 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 GOLGA6L9A6NEM1 432 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 H3BRB1 525 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 HNRNPDLO14979 420 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 ZEB2O60315 1214 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 SMPD1P17405 629 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 GARTP22102 1010 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 CASP14P31944 242 aa18.29■□□□□ 0.52
TRAPPC3-210ENST00000617904 KRT9P35527 623 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms