RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MYH2Q9UKX2 1941 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM205AQ6ZU69 1335 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 THAP12O43422 761 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PSMC4P43686 418 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 KCNJ1P48048 391 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PTENP60484 403 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRRC63Q05C16 580 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 KLRC3Q07444 240 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SFSWAPQ12872 951 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 MKRN3Q13064 507 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 NPY5RQ15761 445 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PPP2R5EQ16537 467 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 EXOC3L4Q17RC7 722 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 TAF1BQ53T94 588 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 MAP7D3Q8IWC1 876 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 ST13P4Q8IZP2 240 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPATA5Q8NB90 893 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 SLCO1B3Q9NPD5 702 aa11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PAIP2BQ9ULR5 123 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-208ENST00000615468 PASKQ96RG2 1323 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 GNA14O95837 355 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 UQCRFS1P1P0C7P4 283 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 MAPK7Q13164 816 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 MTFR1Q15390 333 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRRC36Q1X8D7 754 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 AADACL2Q6P093 401 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 DSTYKQ6XUX3 929 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 UIMC1Q96RL1 719 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPATA16Q9BXB7 569 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 QTRT2Q9H974 415 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 SUCLA2Q9P2R7 463 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 BCL9LQ86UU0 1499 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 RPTORQ8N122 1335 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 KIAA0391O15091 583 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 NOL4O94818 638 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 TMED2Q15363 201 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 KYNUQ16719 465 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 CERKLQ49MI3 558 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZCWPW2Q504Y3 356 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 BTNL9Q6UXG8 535 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 AMIGO3Q86WK7 504 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 GRAMD1AQ96CP6 724 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 MPP4Q96JB8 637 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 IWS1Q96ST2 819 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZDHHC18Q9NUE0 388 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 CNOT7Q9UIV1 285 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 PHTF1Q9UMS5 762 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 WDR91A4D1P6 747 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 A6NJR5 290 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 RASA4BC9J798 803 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 RASA4O43374 803 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 LYNP07948 512 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 OR52Z1P0C646 297 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 RTP1P59025 263 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 SLC34A1Q06495 639 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 TRIP13Q15645 432 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 EPM2AIP1Q7L775 607 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 NT5DC3Q86UY8 548 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 RIBC1Q8N443 379 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 DNAJC1Q96KC8 554 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 ZNF184Q99676 751 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 C7orf25Q9BPX7 421 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 TIPINQ9BVW5 301 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 IQCGQ9H095 443 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 UBN1Q9NPG3 1134 aa11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 SEC63Q9UGP8 760 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-208ENST00000615468 MYMKA6NI61 221 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 GNAT2P19087 354 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 SLC9A1P19634 815 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 COG7P83436 770 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 THOC5Q13769 683 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 C10orf76Q5T2E6 689 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 CCDC137Q6PK04 289 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 SPATA24Q86W54 205 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 GUF1Q8N442 669 aaKnown RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 LRRC57Q8N9N7 239 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 CFAP61Q8NHU2 1237 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 SYN2Q92777 582 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 PPP1R9AQ9ULJ8 1098 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 PFASO15067 1338 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 GFPT2O94808 682 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 KLRK1P26718 216 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 MPP2Q14168 576 aa11.09□□□□□ -0.63
TNFAIP3-208ENST00000615468 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms