RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 MTMR2Q13614 643 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
ATF3-211ENST00000613954 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 ERMNQ8TAM6 284 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
ATF3-211ENST00000613954 NEK9Q8TD19 979 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
ATF3-211ENST00000613954 STMN4Q9H169 189 aaPredicted RBP12.11□□□□□ -0.47
ATF3-211ENST00000613954 GOLPH3Q9H4A6 298 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 TYW1Q9NV66 732 aaKnown RBP12.11□□□□□ -0.47
ATF3-211ENST00000613954 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 DAAM1Q9Y4D1 1078 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 NCANO14594 1321 aa12.11□□□□□ -0.47
ATF3-211ENST00000613954 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 CCT8L1PA6NM43 557 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 POTECB2RU33 542 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 FGGP02679 453 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 ICAM1P05362 532 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 POLR2MP0CAP2 368 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 HSPA6P17066 643 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 DR1Q01658 176 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 BMT2Q1RMZ1 405 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 NOL9Q5SY16 702 aaKnown RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 CEP57Q86XR8 500 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 RFFLQ8WZ73 363 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 ERP44Q9BS26 406 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 DPH5Q9H2P9 285 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 PABPC3Q9H361 631 aaKnown RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 KCNMB3Q9NPA1 279 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATF3-211ENST00000613954 ATP8A1Q9Y2Q0 1164 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 NPHP3-ACAD11A0A0J9YXS1 232 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 DDX3XO00571 662 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATF3-211ENST00000613954 CFBP00751 764 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 CYP3A4P08684 503 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 VCAM1P19320 739 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 MMP13P45452 471 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 PMS2P54278 862 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 BACE1P56817 501 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 SPP2Q13103 211 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 Q4G0T1 1027 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 DCAF17Q5H9S7 520 aaPredicted RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 U2AF1L4Q8WU68 220 aaKnown RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 NSRP1Q9H0G5 558 aaKnown RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 EHMT1Q9H9B1 1298 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 ATP6V0A4Q9HBG4 840 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 GCNT4Q9P109 453 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 PARP2Q9UGN5 583 aa12.1□□□□□ -0.47
ATF3-211ENST00000613954 TPX2Q9ULW0 747 aaKnown RBP12.1□□□□□ -0.47
ATF3-211ENST00000613954 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 TBX3O15119 743 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 AGTP01019 485 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 CIITAP33076 1130 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 GALCP54803 685 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 CACNB1Q02641 598 aaPredicted RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 ADCY2Q08462 1091 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 GIT2Q14161 759 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 CTNNBL1Q8WYA6 563 aaPredicted RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 DCPSQ96C86 337 aaKnown RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 SCLT1Q96NL6 688 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 ZNF317Q96PQ6 595 aaPredicted RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 CCDC134Q9H6E4 229 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
ATF3-211ENST00000613954 SIX2Q9NPC8 291 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 PNMA2Q9UL42 364 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 PPP1R9AQ9ULJ8 1098 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 DNM3Q9UQ16 869 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 ZNF536O15090 1300 aa12.09□□□□□ -0.47
ATF3-211ENST00000613954 DCDC2CA8MYV0 355 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 C19orf81C9J6K1 198 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 CAND2O75155 1236 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 NR3C1P04150 777 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 MMEP08473 750 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 FDX1P10109 184 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 CHN1P15882 459 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 CRELD2Q6UXH1 353 aaPredicted RBP12.08□□□□□ -0.48
ATF3-211ENST00000613954 PIGWQ7Z7B1 504 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
ATF3-211ENST00000613954 SLC30A5Q8TAD4 765 aa12.08□□□□□ -0.48
ATF3-211ENST00000613954 CCHCR1Q8TD31 782 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms