RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 RAG1P15918 1043 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 TYRO3Q06418 890 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 PRPF4BQ13523 1007 aaKnown RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 KNOP1Q1ED39 458 aaKnown RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 CT47A1Q5JQC4 288 aaPredicted RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 PPP4R3CPQ6ZMV5 832 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 TSHZ1Q6ZSZ6 1077 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 TAS1R3Q7RTX0 852 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 CATSPER4Q7RTX7 472 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 ADSSL1Q8N142 457 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 MRPL4Q9BYD3 311 aaKnown RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 NOC2LQ9Y3T9 749 aaKnown RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 GHRP10912 638 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 AXLP30530 894 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 CYP2C18P33260 490 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 CCL23P55773 120 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 FAM43BQ6ZT52 329 aaPredicted RBP16.14■□□□□ 0.17
CD48-203ENST00000613788 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
CD48-203ENST00000613788 BICD1Q96G01 975 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 DHTKD1Q96HY7 919 aaPredicted RBP16.14■□□□□ 0.17
CD48-203ENST00000613788 ST3GAL5Q9UNP4 418 aa16.14■□□□□ 0.17
CD48-203ENST00000613788 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 RFC2P35250 354 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 LIG4P49917 911 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 SNRPFP62306 86 aaKnown RBP16.13■□□□□ 0.17
CD48-203ENST00000613788 KCNA1Q09470 495 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
CD48-203ENST00000613788 PAK2Q13177 524 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 LPIN1Q14693 890 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 DPCR1Q3MIW9 517 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 ZPBP2Q6X784 338 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 HS2ST1Q7LGA3 356 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 FAM228AQ86W67 206 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 C7orf61Q8IZ16 206 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 DPF3Q92784 378 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
CD48-203ENST00000613788 PADI3Q9ULW8 664 aa16.13■□□□□ 0.17
CD48-203ENST00000613788 PDXKO00764 312 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 HNRNPDLO14979 420 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 TSPAN1O60635 241 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 PIGRP01833 764 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 FGFR4P22455 802 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 HOXD13P35453 343 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 MBTPS1Q14703 1052 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 AMHR2Q16671 573 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 TMEM199Q8N511 208 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 GOLGA5Q8TBA6 731 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 FUCA2Q9BTY2 467 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 TARS2Q9BW92 718 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 WNT8AQ9H1J5 351 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 AGO3Q9H9G7 860 aaKnown RBP16.12■□□□□ 0.17
CD48-203ENST00000613788 CHST12Q9NRB3 414 aa16.12■□□□□ 0.17
CD48-203ENST00000613788 CNTNAP2Q9UHC6 1331 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
CD48-203ENST00000613788 CCNE1P24864 410 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
CD48-203ENST00000613788 CD52P31358 61 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 PAK1Q13153 545 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 CENPPQ6IPU0 288 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 P2RX5Q93086 422 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 SCLYQ96I15 445 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 TSG101Q99816 390 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 TCHPQ9BT92 498 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 IFIH1Q9BYX4 1025 aaKnown RBP16.11■□□□□ 0.17
CD48-203ENST00000613788 KCTD10Q9H3F6 313 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 ERVK-5Q9HDB9 667 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 AGPAT5Q9NUQ2 364 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 TYW1Q9NV66 732 aaKnown RBP16.11■□□□□ 0.17
CD48-203ENST00000613788 TNFSF13BQ9Y275 285 aa16.11■□□□□ 0.17
CD48-203ENST00000613788 MKI67P46013 3256 aaKnown RBP16.11■□□□□ 0.17
CD48-203ENST00000613788 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 N4BP3O15049 544 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 B4GALT5O43286 388 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
CD48-203ENST00000613788 NBNO60934 754 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 TOM1L1O75674 476 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 CAVIN2O95810 425 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 ARF4P18085 180 aaPredicted RBP16.1■□□□□ 0.17
CD48-203ENST00000613788 HOXA11P31270 313 aaPredicted RBP16.1■□□□□ 0.17
CD48-203ENST00000613788 ZNF445P59923 1031 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 APBB1IPQ7Z5R6 666 aaPredicted RBP16.1■□□□□ 0.17
CD48-203ENST00000613788 NELFBQ8WX92 580 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 SEPT8Q92599 483 aa16.1■□□□□ 0.17
CD48-203ENST00000613788 APBB2Q92870 758 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms