RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 UBLCP1Q8WVY7 318 aaPredicted RBP23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 SEMA6BQ9H3T3 888 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 CCDC134Q9H6E4 229 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 FAM114A2Q9NRY5 505 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 HOMER2Q9NSB8 354 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 PCDHA4Q9UN74 947 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ATP8B3O60423 1300 aa23.72■■□□□ 1.39
POLR2J3-220ENST00000613744 ADAMTS3O15072 1205 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 ECM2O94769 699 aaPredicted RBP23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 ASIC1P78348 528 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 SLC18A3Q16572 532 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 TDRD12Q587J7 1177 aaKnown RBP23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 GALNT17Q6IS24 598 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 TMC3Q7Z5M5 1100 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 FBXO11Q86XK2 927 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 OR2W6PQ8NHA6 318 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 SPDL1Q96EA4 605 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 FRMD3A2A2Y4 597 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 CCND1P24385 295 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 USP11P51784 963 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 LMNB2Q03252 620 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 EHHADHQ08426 723 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 KRT71Q3SY84 523 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 CROCCP2Q86T23 111 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 REPS2Q8NFH8 660 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 KCNMB3Q9NPA1 279 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 RBPJLQ9UBG7 517 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 KCNG1Q9UIX4 513 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 CCPG1Q9ULG6 757 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 SLC45A1Q9Y2W3 748 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 PCDHA1Q9Y5I3 950 aa23.71■■□□□ 1.39
POLR2J3-220ENST00000613744 F8VZ95 297 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 LUC7L3O95232 432 aaKnown RBP23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 KLRC1P26715 233 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 KIAA0753Q2KHM9 967 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 LBX2Q6XYB7 198 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 TBC1D31Q96DN5 1066 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 RIPK3Q9Y572 518 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 MYH7BA7E2Y1 1941 aa23.7■■□□□ 1.38
POLR2J3-220ENST00000613744 SMCO2A6NFE2 343 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 ATP2C2O75185 946 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 SMNDC1O75940 238 aaKnown RBP eCLIP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 MKRN4PQ13434 485 aaPredicted RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 Q3C1V9 767 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 AP1ARQ63HQ0 302 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 SNRNP48Q6IEG0 339 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 CAPRIN2Q6IMN6 1127 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 CABP7Q86V35 215 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 GUF1Q8N442 669 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 DAGLBQ8NCG7 672 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 CCDC26Q8TAB7 109 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 PARK7Q99497 189 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 AMNQ9BXJ7 453 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 NSRP1Q9H0G5 558 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 ZNF214Q9UL59 606 aaPredicted RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 MYPNQ86TC9 1320 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 PGRMC1O00264 195 aaKnown RBP23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 CNMDO75829 334 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 KIF4AO95239 1232 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 ALAS1P13196 640 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 KIAA0895Q8NCT3 520 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 RASGRP4Q8TDF6 673 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 R3HDMLQ9H3Y0 253 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 SLC39A2Q9NP94 309 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 SAMD15Q9P1V8 674 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 CPA4Q9UI42 421 aa23.69■■□□□ 1.38
POLR2J3-220ENST00000613744 PVALEFA0A1B0GWK0 134 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 SART1O43290 800 aaKnown RBP23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 ICAM1P05362 532 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 PLCG1P19174 1290 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 ZNF131P52739 623 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 CCDC194A0A1B0GVG4 234 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 M0R2N6 131 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 PPFIA2O75334 1257 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 CCNG1P51959 295 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 CRHR2Q13324 411 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 MIS18BP1Q6P0N0 1132 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 TRPM8Q7Z2W7 1104 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 PGM2Q96G03 612 aa23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.68■■□□□ 1.38
POLR2J3-220ENST00000613744 PP2D1A8MPX8 630 aa23.67■■□□□ 1.38
POLR2J3-220ENST00000613744 STAT3P40763 770 aa23.67■■□□□ 1.38
POLR2J3-220ENST00000613744 BIRC2Q13490 618 aa23.67■■□□□ 1.38
POLR2J3-220ENST00000613744 THOC1Q96FV9 657 aaKnown RBP23.67■■□□□ 1.38
POLR2J3-220ENST00000613744 hCG_1984214I3L0E3 225 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 NUDT17P0C025 328 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 FCER1AP12319 257 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 NQO1P15559 274 aaKnown RBP23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 RWDD2BP57060 319 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 APLFQ8IW19 511 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 ZNF713Q8N859 430 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 GBP7Q8N8V2 638 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 TXLNGYQ9BZA5 131 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 ZMYND12Q9H0C1 365 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 NEUROG2Q9H2A3 272 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 C6orf50Q9HD87 102 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 RIC8AQ9NPQ8 531 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 KCNK3O14649 394 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 CLTAP09496 248 aa23.66■■□□□ 1.38
POLR2J3-220ENST00000613744 MMP13P45452 471 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms