RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TMEM184AQ6ZMB5 413 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 IFNLR1Q8IU57 520 aaPredicted RBP19.3■□□□□ 0.68
PRKN-209ENST00000612485 VN1R2Q8NFZ6 395 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 ERMNQ8TAM6 284 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 PIGOQ8TEQ8 1089 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 NRDE2Q9H7Z3 1164 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 RSAD1Q9HA92 442 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 UBN1Q9NPG3 1134 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 KANSL3Q9P2N6 904 aa19.3■□□□□ 0.68
PRKN-209ENST00000612485 INO80B-WBP1J3KQ70 363 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 NCLP19338 710 aaKnown RBP19.29■□□□□ 0.68
PRKN-209ENST00000612485 TECP42680 631 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 TRAPPC10P48553 1259 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 CAPSQ13938 189 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 TTC38Q5R3I4 469 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 NOTUMQ6P988 496 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 AGMOQ6ZNB7 445 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 NOSTRINQ8IVI9 506 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 MRPL43Q8N983 215 aaKnown RBP19.29■□□□□ 0.68
PRKN-209ENST00000612485 ASAP3Q8TDY4 903 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 NACC1Q96RE7 527 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 POLR3CQ9BUI4 534 aaPredicted RBP19.29■□□□□ 0.68
PRKN-209ENST00000612485 NFKBIZQ9BYH8 718 aa19.29■□□□□ 0.68
PRKN-209ENST00000612485 NOL7Q9UMY1 257 aaKnown RBP19.29■□□□□ 0.68
PRKN-209ENST00000612485 USP15Q9Y4E8 981 aaPredicted RBP19.29■□□□□ 0.68
PRKN-209ENST00000612485 FAM86C2PA6NEL3 165 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 TSPAN1O60635 241 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 USO1O60763 962 aaKnown RBP19.28■□□□□ 0.68
PRKN-209ENST00000612485 GALTP07902 379 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 GLRA2P23416 452 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 CA8P35219 290 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 RBM10P98175 930 aaKnown RBP19.28■□□□□ 0.68
PRKN-209ENST00000612485 KCNC3Q14003 757 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 RABEP1Q15276 862 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 ANKRD54Q6NXT1 300 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 VPS52Q8N1B4 723 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 CASP10Q92851 521 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 IGSF21Q96ID5 467 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
PRKN-209ENST00000612485 GBP3Q9H0R5 595 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 POLR3FQ9H1D9 316 aaPredicted RBP19.28■□□□□ 0.68
PRKN-209ENST00000612485 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 STK39Q9UEW8 545 aa19.28■□□□□ 0.68
PRKN-209ENST00000612485 DBR1Q9UK59 544 aaKnown RBP19.28■□□□□ 0.68
PRKN-209ENST00000612485 C5orf42Q9H799 3197 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 A0A087WWV3 80 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 C2orf71A6NGG8 1288 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 MED24O75448 989 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 CXCL14O95715 111 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 ITGA4P13612 1032 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 HOXB8P17481 243 aaPredicted RBP19.27■□□□□ 0.68
PRKN-209ENST00000612485 MBTD1Q05BQ5 628 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 GIT2Q14161 759 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 LLGL2Q6P1M3 1020 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 DDX53Q86TM3 631 aaKnown RBP19.27■□□□□ 0.68
PRKN-209ENST00000612485 TMEM87AQ8NBN3 555 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 MCPH1Q8NEM0 835 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 TMEM175Q9BSA9 504 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 ZBP1Q9H171 429 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 RAPGEFL1Q9UHV5 662 aa19.27■□□□□ 0.68
PRKN-209ENST00000612485 ST18O60284 1047 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 RPA1P27694 616 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 SLC11A1P49279 550 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 HAUS3Q68CZ6 603 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 TMEM173Q86WV6 379 aaPredicted RBP19.26■□□□□ 0.67
PRKN-209ENST00000612485 ZNF280BQ86YH2 543 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 HACE1Q8IYU2 909 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 SMG8Q8ND04 991 aaKnown RBP19.26■□□□□ 0.67
PRKN-209ENST00000612485 SUSD6Q92537 303 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 CPB2Q96IY4 423 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 PHF7Q9BWX1 381 aaPredicted RBP19.26■□□□□ 0.67
PRKN-209ENST00000612485 TRIM6Q9C030 488 aaPredicted RBP19.26■□□□□ 0.67
PRKN-209ENST00000612485 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 DNAJB4Q9UDY4 337 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 HCN4Q9Y3Q4 1203 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 KIF3AQ9Y496 699 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 IPPQ9Y573 584 aa19.26■□□□□ 0.67
PRKN-209ENST00000612485 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.25■□□□□ 0.67
PRKN-209ENST00000612485 PRR33A8MZF0 331 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 CLASP2O75122 1294 aaKnown RBP19.25■□□□□ 0.67
PRKN-209ENST00000612485 ALDH2P05091 517 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 CTSAP10619 480 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 MUTP22033 750 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 AMHR2Q16671 573 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 MAEAQ7L5Y9 396 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 RNF135Q8IUD6 432 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 EIF2AQ9BY44 585 aaKnown RBP19.25■□□□□ 0.67
PRKN-209ENST00000612485 HCFC2Q9Y5Z7 792 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 IRAK3Q9Y616 596 aa19.25■□□□□ 0.67
PRKN-209ENST00000612485 ARHGEF35A5YM69 484 aa19.24■□□□□ 0.67
PRKN-209ENST00000612485 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
PRKN-209ENST00000612485 LOC730098B7Z3J9 87 aa19.24■□□□□ 0.67
PRKN-209ENST00000612485 DDHD2O94830 711 aa19.24■□□□□ 0.67
PRKN-209ENST00000612485 POMCP01189 267 aa19.24■□□□□ 0.67
PRKN-209ENST00000612485 ARF4P18085 180 aaPredicted RBP19.24■□□□□ 0.67
PRKN-209ENST00000612485 U2AF2P26368 475 aaKnown RBP eCLIP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms