RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 UVRAGQ9P2Y5 699 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 AGTP01019 485 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SGSM1Q2NKQ1 1148 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 NANOGNBQ7Z5D8 188 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 FKBP9O95302 570 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 USP14P54578 494 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 FKBP9P1Q75LS8 142 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 CHMP1BQ7LBR1 199 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 CLASP2O75122 1294 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 CCT3P49368 545 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 FBXO11Q86XK2 927 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 ARL10Q8N8L6 244 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 PCYOX1LQ8NBM8 494 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 LPIN2Q92539 896 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 DHX36Q9H2U1 1008 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 EPS8L2Q9H6S3 715 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SCP2P22307 547 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 TYK2P29597 1187 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
HLCS-207ENST00000612277 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 PPP1R36Q96LQ0 422 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 TRIM54Q9BYV2 358 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
HLCS-207ENST00000612277 SMAPO00193 183 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CIITAP33076 1130 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 STAT4Q14765 748 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 RMDN1Q96DB5 314 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CATSPER2Q96P56 530 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CCT8L2Q96SF2 557 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NDST4Q9H3R1 872 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
HLCS-207ENST00000612277 ADCY9O60503 1353 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CHN1P15882 459 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NCAPHQ15003 741 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 IKBIPQ70UQ0 350 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 DTNAQ9Y4J8 743 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 PLCH2O75038 1416 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CCNE1P24864 410 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 MXI1P50539 228 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 PABPC4Q13310 644 aaKnown RBP eCLIP13.1□□□□□ -0.31
HLCS-207ENST00000612277 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 PRUNE1Q86TP1 453 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 ANKRD49Q8WVL7 239 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
HLCS-207ENST00000612277 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NOD2Q9HC29 1040 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 ASNSD1Q9NWL6 643 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 FOXO3O43524 673 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CD58P19256 250 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TTC23LQ6PF05 361 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TTC30BQ8N4P2 665 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 CALML6Q8TD86 181 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 NXF1Q9UBU9 619 aaKnown RBP13.1□□□□□ -0.31
HLCS-207ENST00000612277 ANAPC7Q9UJX3 599 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TTC7AQ9ULT0 858 aaPredicted RBP13.1□□□□□ -0.31
HLCS-207ENST00000612277 STON1Q9Y6Q2 735 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 POGZQ7Z3K3 1410 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 ZAP70P43403 619 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TFAMQ00059 246 aaKnown RBP13.1□□□□□ -0.31
HLCS-207ENST00000612277 LRRC74AQ0VAA2 488 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 POLA2Q14181 598 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 KIRREL3Q8IZU9 778 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 TRABDQ9H4I3 376 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 MRGBPQ9NV56 204 aa13.1□□□□□ -0.31
HLCS-207ENST00000612277 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
HLCS-207ENST00000612277 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 GPS1Q13098 491 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 SURF1Q15526 300 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 FAM45AQ8TCE6 357 aa13.09□□□□□ -0.31
HLCS-207ENST00000612277 SLITRK6Q9H5Y7 841 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms