RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LRIG3Q6UXM1 1119 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 SEPT14Q6ZU15 432 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 ZC3H3Q8IXZ2 948 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 KIRREL3Q8IZU9 778 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 PRPF38AQ8NAV1 312 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 TRIM7Q9C029 511 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 KCNK9Q9NPC2 374 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 CHRNA5P30532 468 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 HOXA10P31260 410 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PTENP60484 403 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 IRX3P78415 501 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 BIRC3Q13489 604 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 TNIP1Q15025 636 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PRELID2Q8N945 189 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 TCP11Q8WWU5 503 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 BORCS6Q96GS4 357 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PI4K2AQ9BTU6 479 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 BAIAP2L1Q9UHR4 511 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 SLC16A3O15427 465 aaKnown RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 CLDN3O15551 220 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 CYP3A4P08684 503 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 NPEPPSP55786 919 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PEX3P56589 373 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 CEP55Q53EZ4 464 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 HP1BP3Q5SSJ5 553 aaPredicted RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 CNPY4Q8N129 248 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 RASGEF1CQ8N431 466 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 PCDHB18PQ96TA0 734 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 DDX23Q9BUQ8 820 aaKnown RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 OLFML3Q9NRN5 406 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 INTS9Q9NV88 658 aaKnown RBP15.15■□□□□ 0.02
COL6A1-207ENST00000612273 RREB1Q92766 1687 aa15.15■□□□□ 0.02
COL6A1-207ENST00000612273 ANKRD62A6NC57 917 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 ECE2O60344 883 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 KRT5P13647 590 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 GAP43P17677 238 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 PRELPP51888 382 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 HIBCHQ6NVY1 386 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-207ENST00000612273 CAPN12Q6ZSI9 719 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 LRRC34Q8IZ02 419 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 GDAP1Q8TB36 358 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 MBOAT7Q96N66 472 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 XPO6Q96QU8 1125 aaKnown RBP15.14■□□□□ 0.01
COL6A1-207ENST00000612273 WDR11Q9BZH6 1224 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 CTNNAL1Q9UBT7 734 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 CLTAP09496 248 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 PPATQ06203 517 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 MAPK7Q13164 816 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 FOXR2Q6PJQ5 311 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 POLR3CQ9BUI4 534 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-207ENST00000612273 VCPKMTQ9H867 229 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 ASIC3Q9UHC3 531 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 TBX3O15119 743 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 TOM1O60784 492 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 PSMD10O75832 226 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 RPSAP08865 295 aaKnown RBP15.14■□□□□ 0.01
COL6A1-207ENST00000612273 BCRP11274 1271 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 MYCLP12524 364 aaPredicted RBP15.14■□□□□ 0.01
COL6A1-207ENST00000612273 PLA2G4FQ68DD2 849 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 CBWD2Q8IUF1 395 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 DAW1Q8N136 415 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 IL31RAQ8NI17 732 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 ZNF653Q96CK0 615 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 HVCN1Q96D96 273 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
COL6A1-207ENST00000612273 KIAA0391O15091 583 aaKnown RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 VAMP7P51809 220 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 POU5F1Q01860 360 aaKnown RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 SEL1L2Q5TEA6 688 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 DUPD1Q68J44 220 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 MIER3Q7Z3K6 550 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 CHMP6Q96FZ7 201 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 ZDHHC15Q96MV8 337 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 RAD17O75943 681 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 FSBPO95073 299 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 UBL4BQ8N7F7 174 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 MKL1Q969V6 931 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 PAIP2Q9BPZ3 127 aaKnown RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 NUP85Q9BW27 656 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 TCEAL9Q9UHQ7 104 aa15.13■□□□□ 0.01
COL6A1-207ENST00000612273 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-207ENST00000612273 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 ZDHHC24Q6UX98 284 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 PLEKHO2Q8TD55 490 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 CARD9Q9H257 536 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 PABPC3Q9H361 631 aaKnown RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 TRPC6Q9Y210 931 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 VCAM1P19320 739 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 EIF2AK2P19525 551 aaKnown RBP15.12■□□□□ 0.01
COL6A1-207ENST00000612273 SCTRP47872 440 aa15.12■□□□□ 0.01
COL6A1-207ENST00000612273 MXI1P50539 228 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms