RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 INPP5FQ9Y2H2 1132 aa13.64□□□□□ -0.23
CBWD3-208ENST00000612050 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 TSPAN1O60635 241 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 CSPG5O95196 566 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 ITGB1P05556 798 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 LIG1P18858 919 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 MBTD1Q05BQ5 628 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 DMP1Q13316 513 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 NOMO2Q5JPE7 1267 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 SLC27A1Q6PCB7 646 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 KCNT2Q6UVM3 1135 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 CABP7Q86V35 215 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 UBE2ZQ9H832 354 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-208ENST00000612050 MINDY3Q9H8M7 445 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 GPRC5CQ9NQ84 441 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 ENTPD7Q9NQZ7 604 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 TLR9Q9NR96 1032 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 KCND2Q9NZV8 630 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
CBWD3-208ENST00000612050 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 N4BP3O15049 544 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 STX6O43752 255 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.23
CBWD3-208ENST00000612050 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
CBWD3-208ENST00000612050 CA8P35219 290 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 SMTNP53814 917 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
CBWD3-208ENST00000612050 LONRF3Q496Y0 759 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 TCEAL5Q5H9L2 206 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 CLLU1OSQ5K130 101 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 SPPL3Q8TCT6 385 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 MRPS27Q92552 414 aaKnown RBP13.62□□□□□ -0.23
CBWD3-208ENST00000612050 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
CBWD3-208ENST00000612050 RPS6KC1Q96S38 1066 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 PRDM6Q9NQX0 595 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 CLDND1Q9NY35 253 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
CBWD3-208ENST00000612050 PP2D1A8MPX8 630 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 E9PMD0 336 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 H0YCG3 227 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 RBAK-RBAKDNI3L0D1 243 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 K7ERI5 159 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 PRKCBP05771 671 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 LINC00271P0C7V0 271 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 CDC25AP30304 524 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 LPPQ93052 612 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 CPB2Q96IY4 423 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 GBP3Q9H0R5 595 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 CWH43Q9H720 699 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 RBM19Q9Y4C8 960 aaKnown RBP13.61□□□□□ -0.23
CBWD3-208ENST00000612050 COL6A3P12111 3177 aa13.61□□□□□ -0.23
CBWD3-208ENST00000612050 SPDYE4A6NLX3 237 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 ALDH2P05091 517 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-208ENST00000612050 ARF4P18085 180 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-208ENST00000612050 KCNA5P22460 613 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 HOXA11P31270 313 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-208ENST00000612050 BCAR1P56945 870 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 STRN3Q13033 797 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 FAM187BQ17R55 369 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 HYIQ5T013 277 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 TMC7Q7Z402 723 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 CDCA3Q99618 268 aaPredicted RBP13.6□□□□□ -0.23
CBWD3-208ENST00000612050 APOL6Q9BWW8 343 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 IGFLR1Q9H665 355 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 TLE6Q9H808 572 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 KMT5AQ9NQR1 393 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 LARSQ9P2J5 1176 aaKnown RBP13.6□□□□□ -0.23
CBWD3-208ENST00000612050 GIT1Q9Y2X7 761 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 IPPQ9Y573 584 aa13.6□□□□□ -0.23
CBWD3-208ENST00000612050 CHD9Q3L8U1 2897 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 PLXNA4Q9HCM2 1894 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 CDH23Q9H251 3354 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 ACKR2O00590 384 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 OFD1O75665 1012 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 NPTXRO95502 500 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 ABCD1P33897 745 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 NDUFV1P49821 464 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 PEX3P56589 373 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 TFF2Q03403 129 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 GIT2Q14161 759 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
CBWD3-208ENST00000612050 IL17AQ16552 155 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 ECM1Q16610 540 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 DCAF4L1Q3SXM0 396 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 SYT2Q8N9I0 419 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-208ENST00000612050 PLIN2Q99541 437 aa13.59□□□□□ -0.23
CBWD3-208ENST00000612050 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms