RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 TRIB2Q92519 343 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 DNAJC7Q99615 494 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 CRACR2AQ9BSW2 395 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 AP5M1Q9H0R1 490 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 SIP14410 1827 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 PHLPP2Q6ZVD8 1323 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 PIGRP01833 764 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 KRT13P13646 458 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 AKR1A1P14550 325 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 FECHP22830 423 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 MAP2K2P36507 400 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 LIG4P49917 911 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 EFNA5P52803 228 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 GRIK4Q16099 956 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 LINC01465Q8N7H1 131 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 RNF149Q8NC42 400 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 ZNF397Q8NF99 534 aaPredicted RBP13.43□□□□□ -0.26
CBWD1-220ENST00000612045 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
CBWD1-220ENST00000612045 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
CBWD1-220ENST00000612045 HTTP42858 3142 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 GOLGA8IPA6NC78 632 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 GOLGA8JA6NMD2 632 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 ASAP2O43150 1006 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 F2P00734 622 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 GJB1P08034 283 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 CYBAP13498 195 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 VEGFBP49765 207 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-220ENST00000612045 TFDP1Q14186 410 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 SNRNP35Q16560 246 aaKnown RBP13.42□□□□□ -0.26
CBWD1-220ENST00000612045 EXOC3L4Q17RC7 722 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
CBWD1-220ENST00000612045 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
CBWD1-220ENST00000612045 MTHFD1LQ6UB35 978 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 CBWD2Q8IUF1 395 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 ZBTB8OSQ8IWT0 167 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 EVPLQ92817 2033 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 KAT2BQ92831 832 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 FBXL18Q96ME1 805 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 CCDC113Q9H0I3 377 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 C2orf40Q9H1Z8 148 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 KCND1Q9NSA2 647 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 USP20Q9Y2K6 914 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
CBWD1-220ENST00000612045 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 DUSP11O75319 330 aaKnown RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 NOL4O94818 638 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 EDN1P05305 212 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 ADRB2P07550 413 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 TRIM49P0CI25 452 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 TRIM49CP0CI26 452 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 TMOD1P28289 359 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 FMO5P49326 533 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 MCCD1P59942 119 aaPredicted RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 MARCH8Q5T0T0 291 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 TMTC1Q8IUR5 882 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 EDEM3Q9BZQ6 932 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 SOWAHDA6NJG2 315 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 MSCO60682 206 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 SLC9A1P19634 815 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 PON1P27169 355 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 VAMP7P51809 220 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 BEX3Q00994 111 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 KIAA0753Q2KHM9 967 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CBWD6Q4V339 395 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CBWD3Q5JTY5 395 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CBWD5Q5RIA9 395 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 SLFN12LQ6IEE8 588 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CYP26C1Q6V0L0 522 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CCAR2Q8N163 923 aaKnown RBP13.41□□□□□ -0.26
CBWD1-220ENST00000612045 GPD1LQ8N335 351 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 PLCB1Q9NQ66 1216 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CEP72Q9P209 647 aa13.41□□□□□ -0.26
CBWD1-220ENST00000612045 CASP8AP2Q9UKL3 1982 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 KAT6AQ92794 2004 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MYL3P08590 195 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 SMIM10L2AP0DMW4 78 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 SMIM10L2BP0DMW5 78 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 PTENP60484 403 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 DLG4P78352 724 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 APBA1Q02410 837 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 TRIM32Q13049 653 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MFSD10Q14728 455 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MEA1Q16626 185 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MAPK6Q16659 721 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 C1orf220Q5T0J3 134 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 DPY19L2P1Q6NXN4 242 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 ZPBP2Q6X784 338 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 CACNA2D4Q7Z3S7 1137 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 PLEKHO2Q8TD55 490 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms