RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 RASIP1Q5U651 963 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PRR5LQ6MZQ0 368 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TTI2Q6NXR4 508 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CEP128Q6ZU80 1094 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CDR2LQ86X02 465 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 RHOT2Q8IXI1 618 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PARP9Q8IXQ6 854 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 DCAF4Q8WV16 495 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NLRP7Q8WX94 980 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 C18orf8Q96DM3 657 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 MTMR8Q96EF0 704 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CHMP6Q96FZ7 201 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 POP1Q99575 1024 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 SPZ1Q9BXG8 430 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 AGXT2Q9BYV1 514 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TMEM117Q9H0C3 514 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 EPN3Q9H201 632 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ETNK1Q9HBU6 452 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 GPRC5CQ9NQ84 441 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 L1RE1Q9UN81 338 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 MYO3BQ8WXR4 1341 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CCDC78A2IDD5 438 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 RNF225M0QZC1 329 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 MCF2LO15068 1137 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TLR3O15455 904 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 PPFIA2O75334 1257 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ZRANB2O95218 330 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNF38-210ENST00000611646 MAP3K6O95382 1288 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NDUFB10O96000 172 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CCND2P30279 289 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 HSD17B3P37058 310 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ECE1P42892 770 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NUMBP49757 651 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NPEPPSP55786 919 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 SOX10P56693 466 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PDIA2Q13087 525 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 AP3B2Q13367 1082 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ORC1Q13415 861 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PDE1CQ14123 709 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 GRIK5Q16478 980 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 SMTNL2Q2TAL5 461 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CDKAL1Q5VV42 579 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 SNRNP48Q6IEG0 339 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 MIS18BP1Q6P0N0 1132 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 C1orf228Q6PIY5 440 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ARHGAP27Q6ZUM4 889 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 RSRC2Q7L4I2 434 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 HAUS6Q7Z4H7 955 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FBXO33Q7Z6M2 555 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ERICH1Q86X53 443 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 DNAAF3Q8N9W5 541 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 KIAA0895Q8NCT3 520 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CYP2W1Q8TAV3 490 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 RFFLQ8WZ73 363 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ATP2A3Q93084 1043 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TMEM143Q96AN5 459 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FAF2Q96CS3 445 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ZNF512BQ96KM6 892 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 CFAP57Q96MR6 1250 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 DNAJC7Q99615 494 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 VCXQ9H320 206 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 HESX1Q9UBX0 185 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 SSX2IPQ9Y2D8 614 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 SYNGAP1Q96PV0 1343 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CFAP69A5D8W1 941 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 MEFVO15553 781 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 CALCAP01258 141 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ITGA4P13612 1032 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NPR1P16066 1061 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 COMTP21964 271 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 GNA15P30679 374 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FMO5P49326 533 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 EIF3BP55884 814 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 MDM2Q00987 491 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 SPP2Q13103 211 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NAB2Q15742 525 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 C16orf86Q6ZW13 317 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 LDHDQ86WU2 507 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 USP38Q8NB14 1042 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PIP4K2CQ8TBX8 421 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 EPS8L3Q8TE67 593 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 ANKS1AQ92625 1134 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ANKRD36BP1Q96IX9 119 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 AGBL1Q96MI9 1066 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FAM49AQ9H0Q0 323 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 VCX3BQ9H321 246 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 NRBP2Q9NSY0 501 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FBXO28Q9NVF7 368 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 HSPBP1Q9NZL4 362 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 MARCOQ9UEW3 520 aaPredicted RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 NOD1Q9Y239 953 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CSADQ9Y600 493 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ZHX2Q9Y6X8 837 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ITSN1Q15811 1721 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TMEM131LA2VDJ0 1609 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 GRID2IPA4D2P6 1211 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TMEM150BA6NC51 233 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 PABPN1LA6NDY0 278 aaKnown RBP4.06□□□□□ -1.76
RNF38-210ENST00000611646 RCCD1A6NED2 376 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 EPHB6O15197 1021 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms