RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SFNP31947 248 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 KRT17Q04695 432 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 ZC2HC1CQ53FD0 456 aaPredicted RBP13.28□□□□□ -0.28
CDH1-212ENST00000611625 MKNK1Q9BUB5 465 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
CDH1-212ENST00000611625 ZWILCHQ9H900 591 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 ARL4CP56559 192 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 PSMD6Q15008 389 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 SURF1Q15526 300 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 ENOSF1Q7L5Y1 443 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 LDHDQ86WU2 507 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 CASKIN2Q8WXE0 1202 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 TTC25Q96NG3 672 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 TUBB6Q9BUF5 446 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
CDH1-212ENST00000611625 CNTNAP4Q9C0A0 1308 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 JAMLQ86YT9 394 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 RHOT1Q8IXI2 618 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 PARP9Q8IXQ6 854 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 NME8Q8N427 588 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 TGS1Q96RS0 853 aaKnown RBP13.28□□□□□ -0.28
CDH1-212ENST00000611625 C3P01024 1663 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 CAPN9O14815 690 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 ARL8AQ96BM9 186 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 JCADQ9P266 1359 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 IQANK1A0A1B0GTG1 560 aa13.27□□□□□ -0.28
CDH1-212ENST00000611625 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.28
CDH1-212ENST00000611625 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.28
CDH1-212ENST00000611625 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.28
CDH1-212ENST00000611625 KIAA0895Q8NCT3 520 aa13.27□□□□□ -0.28
CDH1-212ENST00000611625 DUSP9Q99956 384 aaKnown RBP13.27□□□□□ -0.28
CDH1-212ENST00000611625 MST1RQ04912 1400 aa13.27□□□□□ -0.28
CDH1-212ENST00000611625 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 TLR3O15455 904 aaKnown RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 PTGISQ16647 500 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 HSPBP1Q9NZL4 362 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDH1-212ENST00000611625 PRPSAP2O60256 369 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 FAM107AO95990 144 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 CALB1P05937 261 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 CHN1P15882 459 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 IZUMO3Q5VZ72 239 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 PRPF38AQ8NAV1 312 aaKnown RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 UVRAGQ9P2Y5 699 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 GABBR1Q9UBS5 961 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 NOL3O60936 208 aaKnown RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 CRCPO75575 148 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 MYBL1P10243 752 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 HSD17B3P37058 310 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 GJB7Q6PEY0 223 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 HHIPL2Q6UWX4 724 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.29
CDH1-212ENST00000611625 CYFIP2Q96F07 1278 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 ERP44Q9BS26 406 aa13.27□□□□□ -0.29
CDH1-212ENST00000611625 RIC1Q4ADV7 1423 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 MYO3BQ8WXR4 1341 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 CFAP73A6NFT4 308 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 C21orf2O43822 256 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
CDH1-212ENST00000611625 RPAINQ86UA6 219 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 ALG6Q9Y672 507 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 CLDN3O15551 220 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 SCP2P22307 547 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 GNA15P30679 374 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 HSPA9P38646 679 aaKnown RBP13.26□□□□□ -0.29
CDH1-212ENST00000611625 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 TTC13Q8NBP0 860 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 FAM149B1Q96BN6 582 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 IL17RBQ9NRM6 502 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 SYNJ2BP-COX16A0A087WUM0 186 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 ATP5HO75947 161 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 ZBED1O96006 694 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 TPD52P55327 224 aaPredicted RBP13.26□□□□□ -0.29
CDH1-212ENST00000611625 EEPD1Q7L9B9 569 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 TRIM55Q9BYV6 548 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 CARD9Q9H257 536 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 COX16Q9P0S2 106 aa13.26□□□□□ -0.29
CDH1-212ENST00000611625 A0A0G2JND7 137 aa13.25□□□□□ -0.29
CDH1-212ENST00000611625 NXNQ6DKJ4 435 aa13.25□□□□□ -0.29
CDH1-212ENST00000611625 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
CDH1-212ENST00000611625 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms