RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TTLL13PA6NNM8 815 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
HDDC2-204ENST00000608295 HIP1RO75146 1068 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 EYA4O95677 639 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 EDN1P05305 212 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
HDDC2-204ENST00000608295 RAB27AP51159 221 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 MRPS5P82675 430 aaKnown RBP16.03■□□□□ 0.16
HDDC2-204ENST00000608295 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 CABP7Q86V35 215 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 SPPL3Q8TCT6 385 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 P2RX5Q93086 422 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 HLA-CQ95604 372 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
HDDC2-204ENST00000608295 RSAD1Q9HA92 442 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 CLDND1Q9NY35 253 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 IPPQ9Y573 584 aa16.03■□□□□ 0.16
HDDC2-204ENST00000608295 NPHP3-ACAD11A0A0J9YXS1 232 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 LINC01565O15544 149 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 B4GALT3O60512 393 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 EOMESO95936 686 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 POMCP01189 267 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 PRKCBP05771 671 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 MLH1P40692 756 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 HYAL1Q12794 435 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.16
HDDC2-204ENST00000608295 SMG8Q8ND04 991 aaKnown RBP16.02■□□□□ 0.16
HDDC2-204ENST00000608295 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 ATXN2LQ8WWM7 1075 aaKnown RBP16.02■□□□□ 0.16
HDDC2-204ENST00000608295 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
HDDC2-204ENST00000608295 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 DNAJB4Q9UDY4 337 aa16.02■□□□□ 0.16
HDDC2-204ENST00000608295 SFI1A8K8P3 1242 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 STX6O43752 255 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 SKIP12755 728 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 ITGA4P13612 1032 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 AKAP5P24588 427 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 NRIP1P48552 1158 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 PEX3P56589 373 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 BCAR1P56945 870 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 KARSQ15046 597 aaKnown RBP16.01■□□□□ 0.15
HDDC2-204ENST00000608295 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-204ENST00000608295 URGCPQ8TCY9 931 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 LRRC15Q8TF66 581 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 PGBD4Q96DM1 585 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 MRPL9Q9BYD2 267 aaKnown RBP16.01■□□□□ 0.15
HDDC2-204ENST00000608295 LMAN2LQ9H0V9 348 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 CSRNP2Q9H175 543 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 ENTPD7Q9NQZ7 604 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 TLR9Q9NR96 1032 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 KLK14Q9P0G3 267 aa16.01■□□□□ 0.15
HDDC2-204ENST00000608295 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 PER2O15055 1255 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 OFD1O75665 1012 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 MUTP22033 750 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 NAMPTP43490 491 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 SCNN1GP51170 649 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 ERVFC1P60507 584 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 RBM10P98175 930 aaKnown RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 PPP2R5AQ15172 486 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 ARL6IP4Q66PJ3 421 aaKnown RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 CDCA2Q69YH5 1023 aaPredicted RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 RINT1Q6NUQ1 792 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 ZNF280BQ86YH2 543 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 DAW1Q8N136 415 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 SNX21Q969T3 373 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 CLIC6Q96NY7 704 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 GAD1Q99259 594 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 NRDE2Q9H7Z3 1164 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 PRMT7Q9NVM4 692 aaPredicted RBP16■□□□□ 0.15
HDDC2-204ENST00000608295 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 PARP2Q9UGN5 583 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 COG5Q9UP83 839 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 STK24Q9Y6E0 443 aa16■□□□□ 0.15
HDDC2-204ENST00000608295 PLA2G4BP0C869 781 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 PLCG1P19174 1290 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
HDDC2-204ENST00000608295 AXLP30530 894 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 UBA7P41226 1012 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 SLC11A1P49279 550 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 DLX2Q07687 328 aaPredicted RBP15.99■□□□□ 0.15
HDDC2-204ENST00000608295 PRPF4BQ13523 1007 aaKnown RBP15.99■□□□□ 0.15
HDDC2-204ENST00000608295 MAPK6Q16659 721 aa15.99■□□□□ 0.15
HDDC2-204ENST00000608295 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms