RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 C12orf60Q5U649 245 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CYP4X1Q8N118 509 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 DRAXINQ8NBI3 349 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 B4GALNT2Q8NHY0 566 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 TBC1D10AQ9BXI6 508 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 TAOK3Q9H2K8 898 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ROPN1Q9HAT0 212 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 PITPNM2Q9BZ72 1349 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ERVV-1B6SEH8 477 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 RNF8O76064 485 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CBX6O95503 412 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ACADSP16219 412 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 FOXN2P32314 431 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 FRMD5Q7Z6J6 570 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ZC3H3Q8IXZ2 948 aaKnown RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 SLC30A5Q8TAD4 765 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 EZH1Q92800 747 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ART4Q93070 314 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ITFG2Q969R8 447 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 NIP7Q9Y221 180 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 E7ENQ6 273 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ABLIM1O14639 778 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CYP11B2P19099 503 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ANXA13P27216 316 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 ORC2Q13416 577 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 UBE2SQ16763 222 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 SERPINB12Q96P63 405 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 DENND2DQ9H6A0 471 aaPredicted RBP13.36□□□□□ -0.27
CDCA3-212ENST00000604599 NMRK1Q9NWW6 199 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 NKIRAS1Q9NYS0 192 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 PCDHB13Q9Y5F0 798 aa13.36□□□□□ -0.27
CDCA3-212ENST00000604599 CLIC2O15247 247 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 TAC1P20366 129 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 LMNB1P20700 586 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 ATP5DP30049 168 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-212ENST00000604599 CHKAP35790 457 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 POLGP54098 1239 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-212ENST00000604599 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
CDCA3-212ENST00000604599 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 HAS1Q92839 578 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 SLC35C1Q96A29 364 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 MAGEB18Q96M61 343 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 AAASQ9NRG9 546 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 BSDC1Q9NW68 430 aaPredicted RBP13.35□□□□□ -0.27
CDCA3-212ENST00000604599 TFCP2L1Q9NZI6 479 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 RGL1Q9NZL6 768 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 DNAJC3Q13217 504 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 KYNUQ16719 465 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 KIFAP3Q92845 792 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 GORASP1Q9BQQ3 440 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 VCXQ9H320 206 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 CTTNBP2NLQ9P2B4 639 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 DDX25Q9UHL0 483 aaKnown RBP13.35□□□□□ -0.27
CDCA3-212ENST00000604599 PCDHA12Q9UN75 941 aa13.35□□□□□ -0.27
CDCA3-212ENST00000604599 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SMAPO00193 183 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 TTLL1O95922 423 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SOX5P35711 763 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 ADCY7P51828 1080 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 RCN2Q14257 317 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 DRAP1Q14919 205 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 FOXB2Q5VYV0 432 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 OR52E8Q6IFG1 317 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 ARHGEF18Q6ZSZ5 1173 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 TRMT10CQ7L0Y3 403 aaKnown RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 RPUSD2Q8IZ73 545 aaKnown RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 ZFAND2BQ8WV99 257 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SLC7A6OSQ96CW6 309 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SLCO1B3Q9NPD5 702 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 SAP30BPQ9UHR5 308 aaKnown RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 PASKQ96RG2 1323 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 NVLO15381 856 aaKnown RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 CETPP11597 493 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 RASA1P20936 1047 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 CTNNA2P26232 953 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 HOXD13P35453 343 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 COILP38432 576 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-212ENST00000604599 RANBP1P43487 201 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 ACVR2BQ13705 512 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
CDCA3-212ENST00000604599 KNOP1Q1ED39 458 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms