RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 P2RX7Q99572 595 aaKnown RBP16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 AGPAT1Q99943 283 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 SLC24A3Q9HC58 644 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 OLFML3Q9NRN5 406 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 APEX2Q9UBZ4 518 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 TCRBV7S2A1N4TA0A589 114 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 TMEM120BA0PK00 339 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SFI1A8K8P3 1242 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 PPP1R12AO14974 1030 aaPredicted RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SKAP2O75563 359 aaPredicted RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 COILP38432 576 aaPredicted RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SATB1Q01826 763 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 GRAPQ13588 217 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 LONRF1Q17RB8 773 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 ASRGL1Q7L266 308 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 GRAPLQ8TC17 118 aaPredicted RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 LENG9Q96B70 501 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 MKNK1Q9BUB5 465 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 TMEM110-MUSTN1A8MSY1 372 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 TBX3O15119 743 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 COG2Q14746 738 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 ARHGAP44Q17R89 818 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 Q4G0T1 1027 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 TRMT10CQ7L0Y3 403 aaKnown RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 CYFIP1Q7L576 1253 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 SLC20A1Q8WUM9 679 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 ARHGEF2Q92974 986 aaKnown RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 DDX23Q9BUQ8 820 aaKnown RBP16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 PRKAG3Q9UGI9 489 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 ARL2BPQ9Y2Y0 163 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
LYSMD4-211ENST00000604213 CNTNAP4Q9C0A0 1308 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 O00370 1275 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 FOXN3O00409 490 aaPredicted RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 MEIS2O14770 477 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 EIF3DO15371 548 aaKnown RBP eCLIP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 PYGMP11217 842 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 GAP43P17677 238 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 COMTP21964 271 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 NMT1P30419 496 aaKnown RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 SPATA21Q7Z572 469 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CCDC25Q86WR0 208 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 ERICH1Q86X53 443 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CNKSR1Q969H4 720 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 RPS6KC1Q96S38 1066 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 EYA4O95677 639 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 TRIM49P0CI25 452 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 TRIM49CP0CI26 452 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 GRIK3Q13003 919 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 PICALMQ13492 652 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 SIX1Q15475 284 aaPredicted RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 ZC2HC1CQ53FD0 456 aaPredicted RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 LRCH2Q5VUJ6 765 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 NUGGCQ68CJ6 796 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 PHLDB3Q6NSJ2 640 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CCDC105Q8IYK2 499 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CKAP2Q8WWK9 683 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 IFT74Q96LB3 600 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 SERPINB12Q96P63 405 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 CDC42EP4Q9H3Q1 356 aaKnown RBP16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 RXFP1Q9HBX9 757 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 AAASQ9NRG9 546 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 PTPN22Q9Y2R2 807 aa16.41■□□□□ 0.22
LYSMD4-211ENST00000604213 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 PASKQ96RG2 1323 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 IL1R1P14778 569 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 MSH2P43246 934 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 SLC13A5Q86YT5 568 aaPredicted RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 CD101Q93033 1021 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 CRAMP1Q96RY5 1269 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 PLCD4Q9BRC7 762 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 DMAC2Q9NW81 257 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 ADAM22Q9P0K1 906 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 VAV3Q9UKW4 847 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 RABGAP1Q9Y3P9 1069 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 TP73O15350 636 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 LRRN2O75325 713 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 KCNJ1P48048 391 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 GPSM2P81274 684 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 MYL7Q01449 175 aa16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 MAP2K1Q02750 393 aaPredicted RBP16.4■□□□□ 0.22
LYSMD4-211ENST00000604213 AP3B2Q13367 1082 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms