RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 STK33Q9BYT3 514 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 DPH5Q9H2P9 285 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 FANCEQ9HB96 536 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 AIPL1Q9NZN9 384 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SELENONQ9NZV5 590 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 HACD3Q9P035 362 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SAMD15Q9P1V8 674 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 COQ6Q9Y2Z9 468 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 TELO2Q9Y4R8 837 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 CAPN6Q9Y6Q1 641 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ATP10DQ9P241 1426 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 CPLX1O14810 134 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ICMTO60725 284 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 RNGTTO60942 597 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 EGFRP00533 1210 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 PRKACAP17612 351 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 EPS15P42566 896 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 VAV2P52735 878 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MLLT6P55198 1093 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 PRKCEQ02156 737 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 FLIIQ13045 1269 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 LPIN1Q14693 890 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 PSMD6Q15008 389 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 TGFBIQ15582 683 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 ZNF658Q5TYW1 1059 aaPredicted RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 RESP18Q5W5W9 173 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 BORAQ6PGQ7 559 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MAEAQ7L5Y9 396 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MRPL10Q7Z7H8 261 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SLC38A6Q8IZM9 456 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 NATD1Q8N6N6 113 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 NOC3LQ8WTT2 800 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 MOGAT1Q96PD6 335 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 UBN1Q9NPG3 1134 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 UVRAGQ9P2Y5 699 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 KCNN3Q9UGI6 736 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 TDRKHQ9Y2W6 561 aaKnown RBP9.47□□□□□ -0.89
COMMD3-215ENST00000602574 SAR1BQ9Y6B6 198 aa9.47□□□□□ -0.89
COMMD3-215ENST00000602574 CACNA1FO60840 1977 aa9.46□□□□□ -0.89
COMMD3-215ENST00000602574 PCDH11XQ9BZA7 1347 aa9.46□□□□□ -0.89
COMMD3-215ENST00000602574 CCNT1O60563 726 aaKnown RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 UBOX5O94941 541 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 CHEK2O96017 543 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 OAS1P00973 400 aaKnown RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 IDEP14735 1019 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 NR2C2P49116 596 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 CCR3P51677 355 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 KRT76Q01546 638 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 SQLEQ14534 574 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 KRT71Q3SY84 523 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 PPP4R4Q6NUP7 873 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 HSD3B7Q9H2F3 369 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 TUT1Q9H6E5 874 aaKnown RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 FARSBQ9NSD9 589 aaKnown RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 SEPT11Q9NVA2 429 aaKnown RBP9.46□□□□□ -0.9
COMMD3-215ENST00000602574 FANCLQ9NW38 375 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 THEGQ9P2T0 379 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 UGGT1Q9NYU2 1555 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 DLG5Q8TDM6 1919 aa9.46□□□□□ -0.9
COMMD3-215ENST00000602574 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 A8MUI8 341 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 RNMTO43148 476 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 EXTL3O43909 919 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 ZNF862O60290 1169 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 OR5F1O95221 314 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 CRABP2P29373 138 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 RPL9P32969 192 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 EVI2BP34910 448 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 HOXD13P35453 343 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 KLHL30Q0D2K2 578 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 GRM2Q14416 872 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 STK11Q15831 433 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NFE2Q16621 373 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 FAM133BQ5BKY9 247 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 NET1Q7Z628 596 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 GIMAP8Q8ND71 665 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 TTC9Q92623 222 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 INPP5DQ92835 1189 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 HSPBAP1Q96EW2 488 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 METTL2AQ96IZ6 378 aaKnown RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 MMS19Q96T76 1030 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 LZTFL1Q9NQ48 299 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 CASS4Q9NQ75 786 aa9.45□□□□□ -0.9
COMMD3-215ENST00000602574 C9orf78Q9NZ63 289 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-215ENST00000602574 PPP1R1BQ9UD71 204 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms