RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	CCDC69	A6NI79	296 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	NRP1	O14786	923 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	GLUD1	P00367	558 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	IGHD	P01880	384 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	PSAP	P07602	524 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	SPATA31D3	P0C874	917 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	CALM1	P0DP23	149 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	CALM2	P0DP24	149 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	CALM3	P0DP25	149 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	ZNF76	P36508	570 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	LIFR	P42702	1097 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	AK2	P54819	239 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	PRKCE	Q02156	737 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	CASC1	Q6TDU7	716 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	NFXL1	Q6ZNB6	911 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	SPATA31D4	Q6ZUB0	917 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	GET4	Q7L5D6	327 aa	Predicted RBP	12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	LENG9	Q96B70	501 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	SCLT1	Q96NL6	688 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	ZNF577	Q9BSK1	485 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	HERC2P3	Q9BVR0	1158 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	NT5C3A	Q9H0P0	336 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	TBC1D22B	Q9NU19	505 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	SPATA6	Q9NWH7	488 aa	Predicted RBP	12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	1e-7	■■■□□ 15.8
NUP62-222	ENST00000600935	STK39	Q9UEW8	545 aa		12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	PIN4	Q9Y237	131 aa	Known RBP	12.47	□□□□□ -0.41
NUP62-222	ENST00000600935	NBEA	Q8NFP9	2946 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935		A0A087WZ62	844 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	IGKV6-21	A0A0C4DH24	114 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	SMCO2	A6NFE2	343 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935		F8W810	466 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	LAMTOR5	O43504	91 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	UROD	P06132	367 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	ADH1A	P07327	375 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	CHML	P26374	656 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	CSTF1	Q05048	431 aa	Known RBP	12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	SNW1	Q13573	536 aa	Known RBP	12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	PARM1	Q6UWI2	310 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	TMTC2	Q8N394	836 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	MAP4K1	Q92918	833 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	TMEM87B	Q96K49	555 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	TMEM175	Q9BSA9	504 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	ZSCAN32	Q9NX65	697 aa		12.46	□□□□□ -0.41
NUP62-222	ENST00000600935	FASN	P49327	2511 aa	Known RBP	12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	LAMA5	O15230	3695 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	TMEM150B	A6NC51	233 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SGSM2	O43147	1006 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	EDIL3	O43854	480 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	STBD1	O95210	358 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SKI	P12755	728 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SFPQ	P23246	707 aa	Known RBP eCLIP	12.45	□□□□□ -0.42	8e-6	■■■■□ 25.1
NUP62-222	ENST00000600935	RAB27A	P51159	221 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	JAKMIP3	Q5VZ66	844 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	LILRA6	Q6PI73	481 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	TSSK4	Q6SA08	328 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	MRPL10	Q7Z7H8	261 aa	Known RBP	12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	MICU3	Q86XE3	530 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	HDAC7	Q8WUI4	952 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	ATRIP	Q8WXE1	791 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SHD	Q96IW2	340 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	LRRC2	Q9BYS8	371 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	BCO2	Q9BYV7	579 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	OSBPL6	Q9BZF3	934 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	PRKD2	Q9BZL6	878 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	BARHL2	Q9NY43	387 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	FAN1	Q9Y2M0	1017 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	PCDHB2	Q9Y5E7	798 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	RBM8A	Q9Y5S9	174 aa	Known RBP	12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SLC12A7	Q9Y666	1083 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	NOTCH4	Q99466	2003 aa		12.45	□□□□□ -0.42
NUP62-222	ENST00000600935	SMG1	Q96Q15	3661 aa	Known RBP	12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	SHISA7	A6NL88	538 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	WDR64	B1ANS9	1081 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	TGM5	O43548	720 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	POMC	P01189	267 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	ALDH2	P05091	517 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	TDGF1	P13385	188 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	CD72	P21854	359 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	MCM5	P33992	734 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	GLUD2	P49448	558 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	SET	Q01105	290 aa	Predicted RBP	12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	DSG1	Q02413	1049 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	PRKCQ	Q04759	706 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	FZD5	Q13467	585 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	MLF2	Q15773	248 aa	Predicted RBP	12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	PPM1J	Q5JR12	505 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	UBXN11	Q5T124	520 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	TTC22	Q5TAA0	569 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	SGMS1	Q86VZ5	419 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	KSR1	Q8IVT5	923 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	COLGALT2	Q8IYK4	626 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	URGCP	Q8TCY9	931 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	CLDN23	Q96B33	292 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	B3GALT6	Q96L58	329 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	PLEKHA4	Q9H4M7	779 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	RSAD1	Q9HA92	442 aa		12.44	□□□□□ -0.42
NUP62-222	ENST00000600935	LTB4R2	Q9NPC1	389 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms