RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 DBR1Q9UK59 544 aaKnown RBP17.58■□□□□ 0.4
VRK3-221ENST00000600284 BARX2Q9UMQ3 279 aaPredicted RBP17.58■□□□□ 0.4
VRK3-221ENST00000600284 DCXO43602 365 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.4
VRK3-221ENST00000600284 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
VRK3-221ENST00000600284 MUTP22033 750 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 RNASELQ05823 741 aaKnown RBP17.57■□□□□ 0.4
VRK3-221ENST00000600284 GNL2Q13823 731 aaKnown RBP17.57■□□□□ 0.4
VRK3-221ENST00000600284 GIT2Q14161 759 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 AGMOQ6ZNB7 445 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 DDX53Q86TM3 631 aaKnown RBP17.57■□□□□ 0.4
VRK3-221ENST00000600284 CATSPER3Q86XQ3 398 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 NOSTRINQ8IVI9 506 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 VN1R2Q8NFZ6 395 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 PIGOQ8TEQ8 1089 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 IGSF21Q96ID5 467 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 RSAD1Q9HA92 442 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 C11orf16Q9NQ32 467 aa17.57■□□□□ 0.4
VRK3-221ENST00000600284 C2orf71A6NGG8 1288 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 MEIS3P2A8K0S8 358 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 HIDE1A8MVS5 230 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 TSPAN1O60635 241 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 GALTP07902 379 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 OR52Z1P0C646 297 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 HOXB8P17481 243 aaPredicted RBP17.56■□□□□ 0.4
VRK3-221ENST00000600284 RPA1P27694 616 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 TECP42680 631 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 RABEP1Q15276 862 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 ZNF174Q15697 407 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 LONRF3Q496Y0 759 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 MCPH1Q8NEM0 835 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 NOL7Q9UMY1 257 aaKnown RBP17.56■□□□□ 0.4
VRK3-221ENST00000600284 INPP5FQ9Y2H2 1132 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
VRK3-221ENST00000600284 ARIH1Q9Y4X5 557 aaPredicted RBP17.56■□□□□ 0.4
VRK3-221ENST00000600284 IRAK3Q9Y616 596 aa17.56■□□□□ 0.4
VRK3-221ENST00000600284 INO80B-WBP1J3KQ70 363 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 INPPL1O15357 1258 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 GLRA2P23416 452 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 U2AF2P26368 475 aaKnown RBP eCLIP17.55■□□□□ 0.4
VRK3-221ENST00000600284 MBTD1Q05BQ5 628 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 CAPSQ13938 189 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 TTC38Q5R3I4 469 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 ANKRD54Q6NXT1 300 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 ASAP3Q8TDY4 903 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 SUSD6Q92537 303 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 CASP10Q92851 521 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 TMEM175Q9BSA9 504 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
VRK3-221ENST00000600284 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 STK24Q9Y6E0 443 aa17.55■□□□□ 0.4
VRK3-221ENST00000600284 ARID2Q68CP9 1835 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 PRR33A8MZF0 331 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 LOC730098B7Z3J9 87 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 USO1O60763 962 aaKnown RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 MED24O75448 989 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 CXCL14O95715 111 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 ALDH2P05091 517 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 CTSAP10619 480 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 ITGA4P13612 1032 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 PDIA5Q14554 519 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 CBX2Q14781 532 aaPredicted RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 AMHR2Q16671 573 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 ZNF280BQ86YH2 543 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 VPS52Q8N1B4 723 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 SMG8Q8ND04 991 aaKnown RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 FAM193BQ96PV7 902 aaPredicted RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 ZBP1Q9H171 429 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 POLR3FQ9H1D9 316 aaPredicted RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 S1PR5Q9H228 398 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
VRK3-221ENST00000600284 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 IPPQ9Y573 584 aa17.54■□□□□ 0.4
VRK3-221ENST00000600284 ST18O60284 1047 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 SLC11A1P49279 550 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.4
VRK3-221ENST00000600284 RBM10P98175 930 aaKnown RBP17.53■□□□□ 0.4
VRK3-221ENST00000600284 TPRNQ4KMQ1 711 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 HERC4Q5GLZ8 1057 aaPredicted RBP17.53■□□□□ 0.4
VRK3-221ENST00000600284 TMEM173Q86WV6 379 aaPredicted RBP17.53■□□□□ 0.4
VRK3-221ENST00000600284 HACE1Q8IYU2 909 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 PRIMPOLQ96LW4 560 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 DNAJB4Q9UDY4 337 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 GIT1Q9Y2X7 761 aa17.53■□□□□ 0.4
VRK3-221ENST00000600284 A0A087WWV3 80 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 A0A1B0GUA9 196 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 CLASP2O75122 1294 aaKnown RBP17.52■□□□□ 0.4
VRK3-221ENST00000600284 DDHD2O94830 711 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 ARF4P18085 180 aaPredicted RBP17.52■□□□□ 0.4
VRK3-221ENST00000600284 LLGL2Q6P1M3 1020 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 SYCE2Q6PIF2 218 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 PPP4R3CPQ6ZMV5 832 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 RNF135Q8IUD6 432 aa17.52■□□□□ 0.4
VRK3-221ENST00000600284 TMEM87AQ8NBN3 555 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms