RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PRMT7Q9NVM4 692 aaPredicted RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 LARSQ9P2J5 1176 aaKnown RBP15.16■□□□□ 0.02
VRK3-219ENST00000600137 USP25Q9UHP3 1055 aa15.16■□□□□ 0.02
VRK3-219ENST00000600137 K7ERI5 159 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 TRAK2O60296 914 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ZNF623O75123 536 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PPP1R37O75864 691 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 FAM13AO94988 1023 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PRKCBP05771 671 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 MYOGP15173 224 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 LIG1P18858 919 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 NMT1P30419 496 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 AXLP30530 894 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 AFMP43652 599 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 KCNJ6P48051 423 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 SARSP49591 514 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 EFNA5P52803 228 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 SMAD3P84022 425 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 DMP1Q13316 513 aaPredicted RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 CUL4BQ13620 913 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ZNF720Q7Z2F6 126 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 HAUS6Q7Z4H7 955 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 SFR1Q86XK3 245 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ZBTB8OSQ8IWT0 167 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 MYCT1Q8N699 235 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ZNF689Q96CS4 500 aaPredicted RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 LRCH3Q96II8 777 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PRIMPOLQ96LW4 560 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PBX4Q9BYU1 374 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 BLZF1Q9H2G9 400 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 ST6GALNAC4Q9H4F1 302 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 C1orf112Q9NSG2 853 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 YBX2Q9Y2T7 364 aaKnown RBP15.15■□□□□ 0.02
VRK3-219ENST00000600137 CNTNAP2Q9UHC6 1331 aa15.15■□□□□ 0.02
VRK3-219ENST00000600137 DENND3A2RUS2 1198 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 ABLIM1O14639 778 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 AMHP03971 560 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 KRT18P05783 430 aaKnown RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 ZSCAN20P17040 1043 aaPredicted RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 GTF2BQ00403 316 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 MAPK6Q16659 721 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 SMG8Q8ND04 991 aaKnown RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 ACO2Q99798 780 aaKnown RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 EIF2AQ9BY44 585 aaKnown RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 ELAC1Q9H777 363 aaKnown RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 KCNG1Q9UIX4 513 aa15.14■□□□□ 0.01
VRK3-219ENST00000600137 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
VRK3-219ENST00000600137 LCHNA4D1U4 455 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 MEIS3P2A8K0S8 358 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PRPF40AO75400 957 aaKnown RBP15.13■□□□□ 0.01
VRK3-219ENST00000600137 NR1I2O75469 434 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 DGKIO75912 1065 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 UPP2O95045 317 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 LINC00271P0C7V0 271 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PROZP22891 400 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 SMTNP53814 917 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 AMPD3Q01432 767 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 ZC2HC1CQ53FD0 456 aaPredicted RBP15.13■□□□□ 0.01
VRK3-219ENST00000600137 FAM117BQ6P1L5 589 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 NPAS4Q8IUM7 802 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 GLIS3Q8NEA6 775 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
VRK3-219ENST00000600137 HPS3Q969F9 1004 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 RAD9AQ99638 391 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 LRRC27Q9C0I9 530 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PDZD7Q9H5P4 517 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 LMBRD1Q9NUN5 540 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 FAM105AQ9NUU6 356 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PANK4Q9NVE7 773 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 DACT1Q9NYF0 836 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 SEL1LQ9UBV2 794 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PCDHA11Q9Y5I1 949 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PHLPP2Q6ZVD8 1323 aa15.13■□□□□ 0.01
VRK3-219ENST00000600137 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 TBCAO75347 108 aaKnown RBP15.12■□□□□ 0.01
VRK3-219ENST00000600137 ERLIN2O94905 339 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 EOMESO95936 686 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 IDEP14735 1019 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 GAP43P17677 238 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 GATMP50440 423 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 FXR1P51114 621 aaKnown RBP eCLIP15.12■□□□□ 0.01
VRK3-219ENST00000600137 CASP5P51878 434 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 COASYQ13057 564 aa15.12■□□□□ 0.01
VRK3-219ENST00000600137 PRPF4BQ13523 1007 aaKnown RBP15.12■□□□□ 0.01
VRK3-219ENST00000600137 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
VRK3-219ENST00000600137 TWF2Q6IBS0 349 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms