RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 ADAMTS1Q9UHI8 967 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 SALL4Q9UJQ4 1053 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 MYO6Q9UM54 1294 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 EXOC7Q9UPT5 735 aa18.56■□□□□ 0.56
SHKBP1-216ENST00000598201 EMSYQ7Z589 1322 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 PJA2O43164 708 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 POLGP54098 1239 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 HSP90AA2PQ14568 343 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 SLC18A3Q16572 532 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 METTL7BQ6UX53 244 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 ZNF571Q7Z3V5 609 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 CBWD2Q8IUF1 395 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 ANKRD13CQ8N6S4 541 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 LMO3Q8TAP4 145 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 SAAL1Q96ER3 474 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 MROH8Q9H579 483 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 DHX33Q9H6R0 707 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 CAPN6Q9Y6Q1 641 aa18.55■□□□□ 0.56
SHKBP1-216ENST00000598201 LRRN2O75325 713 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 CRHR2Q13324 411 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 UBXN4Q92575 508 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 NIFKQ9BYG3 293 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 ARHGAP28Q9P2N2 729 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 MOCS3O95396 460 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 TCF7P36402 384 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 GCLMP48507 274 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 TMEM63BQ5T3F8 832 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 RSRC2Q7L4I2 434 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 FBXO16Q8IX29 292 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 ASAP3Q8TDY4 903 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 IFT74Q96LB3 600 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 BEGAINQ9BUH8 593 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 PUF60Q9UHX1 559 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 DNAJC12Q9UKB3 198 aa18.54■□□□□ 0.56
SHKBP1-216ENST00000598201 MAPK13O15264 365 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 PRKCIP41743 596 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 STAT5BP51692 787 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 SNRNP35Q16560 246 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 PHLDB3Q6NSJ2 640 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 TRAPPC11Q7Z392 1133 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 SEPT1Q8WYJ6 367 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 GPR88Q9GZN0 384 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 EPC1Q9H2F5 836 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 USP20Q9Y2K6 914 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 TBC1D8O95759 1140 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 GLRA2P23416 452 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 GCLCP48506 637 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 TUBB2AQ13885 445 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 TARBP2Q15633 366 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 PAPD7Q5XG87 772 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 FBXO38Q6PIJ6 1188 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 SRGAP1Q7Z6B7 1085 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 AFAP1L1Q8TED9 768 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 TUBB2BQ9BVA1 445 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 PACSIN1Q9BY11 444 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 APEX2Q9UBZ4 518 aa18.53■□□□□ 0.56
SHKBP1-216ENST00000598201 MCM3APO60318 1980 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 F8VZ95 297 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 GFPT2O94808 682 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 MCCD1P59942 119 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 DRAP1Q14919 205 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 CELF3Q5SZQ8 465 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 SHCBP1Q8NEM2 672 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 GTF3C2Q8WUA4 911 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 MPHOSPH6Q99547 160 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 GPR20Q99678 358 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 CFHR5Q9BXR6 569 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 STK33Q9BYT3 514 aa18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 BZW2Q9Y6E2 419 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-216ENST00000598201 HNRNPDLO14979 420 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 SRGAP2O75044 1071 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 ARL2P36404 184 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 EPC2Q52LR7 807 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 TEX35Q5T0J7 233 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 FAM160B1Q5W0V3 765 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 CCDC62Q6P9F0 684 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 TRIM50Q86XT4 487 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 MORC4Q8TE76 937 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 COPS5Q92905 334 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 TMEM117Q9H0C3 514 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 SAGE1Q9NXZ1 904 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 CPA4Q9UI42 421 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 ZNFX1Q9P2E3 1918 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 SOX5P35711 763 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 STAT1P42224 750 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 CHMP4BP1P59074 171 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 WHAMMP3Q1A5X7 153 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 BRDTQ58F21 947 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 MTERF4Q7Z6M4 381 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 DNAAF5Q86Y56 855 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 GPRC5AQ8NFJ5 357 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 OLIG1Q8TAK6 271 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 SLC7A3Q8WY07 619 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms