RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ADAM2Q99965 735 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 CHST12Q9NRB3 414 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 ACKR2O00590 384 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 MBD3O95983 291 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 SCP2P22307 547 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 AMHR2Q16671 573 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 FAM187BQ17R55 369 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 ZC2HC1CQ53FD0 456 aaPredicted RBP24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 PPP4R3CPQ6ZMV5 832 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 SMARCE1Q969G3 411 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 CPB2Q96IY4 423 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 MTIF3Q9H2K0 278 aaKnown RBP24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 AGPAT5Q9NUQ2 364 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 USP20Q9Y2K6 914 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 PCDHB13Q9Y5F0 798 aa24.32■■□□□ 1.48
CHMP2A-204ENST00000597848 MYH11P35749 1972 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 TET1Q8NFU7 2136 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 ENPP3O14638 875 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 CEP290O15078 2479 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 MGEA5O60502 916 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 EFCAB14O75071 495 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 BAIAP3O94812 1187 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 ARF4P18085 180 aaPredicted RBP24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 IBSPP21815 317 aaPredicted RBP24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 AXLP30530 894 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 ABCD1P33897 745 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 GTF2BQ00403 316 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 SHHQ15465 462 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 C9orf50Q5SZB4 431 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 TWF2Q6IBS0 349 aaKnown RBP24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 CHRDL2Q6WN34 429 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 FAM43BQ6ZT52 329 aaPredicted RBP24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 STXBP4Q6ZWJ1 553 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 TAS1R3Q7RTX0 852 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 HERVK_113Q902F9 699 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 BICD1Q96G01 975 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 ST6GALNAC4Q9H4F1 302 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 SLC39A2Q9NP94 309 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 TBX20Q9UMR3 447 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 PCDHA5Q9Y5H7 936 aa24.31■■□□□ 1.48
CHMP2A-204ENST00000597848 MYBP10242 640 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 HOXA11P31270 313 aaPredicted RBP24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 KCNJ6P48051 423 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 PSMD2Q13200 908 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 DSC3Q14574 896 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 NOTUMQ6P988 496 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 RTN4RL1Q86UN2 441 aaPredicted RBP24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 RNPC3Q96LT9 517 aaKnown RBP24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 MRPL4Q9BYD3 311 aaKnown RBP24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 FGFBP2Q9BYJ0 223 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 CLSTN2Q9H4D0 955 aa24.3■■□□□ 1.48
CHMP2A-204ENST00000597848 TTLL13PA6NNM8 815 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 PTMSP20962 102 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 BMP8BP34820 402 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 CASP5P51878 434 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 EHHADHQ08426 723 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 ALCAMQ13740 583 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 NT5DC1Q5TFE4 455 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.29■■□□□ 1.487e-9■■■■□ 26.5
CHMP2A-204ENST00000597848 CDR2LQ86X02 465 aaPredicted RBP24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 LINC01599Q8WXQ3 324 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 GSDMAQ96QA5 445 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 TARS2Q9BW92 718 aaKnown RBP24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 NUP62CLQ9H1M0 184 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 TSPYL2Q9H2G4 693 aaPredicted RBP24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 RGS18Q9NS28 235 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 RMND1Q9NWS8 449 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 CNTNAP2Q9UHC6 1331 aa24.29■■□□□ 1.48
CHMP2A-204ENST00000597848 PRPF6O94906 941 aaKnown RBP24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 AMHP03971 560 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 EDN1P05305 212 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 WDR5P61964 334 aaKnown RBP24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 KCNB1Q14721 858 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 ATF7IP2Q5U623 682 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 GLIS3Q8NEA6 775 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 HVCN1Q96D96 273 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 ACCSQ96QU6 501 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 C1orf112Q9NSG2 853 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 CXXC1Q9P0U4 656 aaPredicted RBP24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 SLC4A7Q9Y6M7 1214 aa24.28■■□□□ 1.48
CHMP2A-204ENST00000597848 A0A1B0GUA9 196 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 N4BP3O15049 544 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 PPP1R37O75864 691 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 RHOBTB3O94955 611 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 STK4Q13043 487 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 L1TD1Q5T7N2 865 aaKnown RBP24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 SLC24A5Q71RS6 500 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 MYOCDQ8IZQ8 938 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 SYCP3Q8IZU3 236 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 KCNN1Q92952 543 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 CCDC51Q96ER9 411 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 ACO2Q99798 780 aaKnown RBP24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 TCHPQ9BT92 498 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 STRA6Q9BX79 667 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 EXOC7Q9UPT5 735 aa24.27■■□□□ 1.48
CHMP2A-204ENST00000597848 LIG4P49917 911 aa24.26■■□□□ 1.47
CHMP2A-204ENST00000597848 PRPF38BQ5VTL8 546 aaKnown RBP24.26■■□□□ 1.47
CHMP2A-204ENST00000597848 MAP4K3Q8IVH8 894 aa24.26■■□□□ 1.47
CHMP2A-204ENST00000597848 ADPGKQ9BRR6 497 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms