RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CHST12Q9NRB3 414 aa12.3□□□□□ -0.44
ZNF548-207ENST00000597400 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
ZNF548-207ENST00000597400 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
ZNF548-207ENST00000597400 SPEGQ15772 3267 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 ANHXE9PGG2 379 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 hCG_1984214I3L0E3 225 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 CHMP2AO43633 222 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 ZNF623O75123 536 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 POMCP01189 267 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 SOD2P04179 222 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 LAMP2P13473 410 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 AK2P54819 239 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 RTN1Q16799 776 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 MTERF2Q49AM1 385 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 GET4Q7L5D6 327 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 ZNF713Q8N859 430 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 SMG7Q92540 1137 aaKnown RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 FGF14Q92915 247 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 B3GALT6Q96L58 329 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 RPS6KC1Q96S38 1066 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 HERC2P3Q9BVR0 1158 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 RHOBTB2Q9BYZ6 727 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 UNC45AQ9H3U1 944 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 SLC2A4RGQ9NR83 387 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 MRPL17Q9NRX2 175 aaKnown RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 RBM28Q9NW13 759 aaKnown RBP12.29□□□□□ -0.44
ZNF548-207ENST00000597400 PCDHB2Q9Y5E7 798 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 LAMA1P25391 3075 aa12.29□□□□□ -0.44
ZNF548-207ENST00000597400 RALGAPA1Q6GYQ0 2036 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 ZZEF1O43149 2961 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 MSH4O15457 936 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 GLUD1P00367 558 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 URODP06132 367 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 SFPQP23246 707 aaKnown RBP eCLIP12.28□□□□□ -0.44
ZNF548-207ENST00000597400 CIITAP33076 1130 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 STARD6P59095 220 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 AAMPQ13685 434 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 CREB3L3Q68CJ9 461 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 RSPH1Q8WYR4 309 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 TMEM175Q9BSA9 504 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 ZMYND12Q9H0C1 365 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 MINDY3Q9H8M7 445 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 RSAD1Q9HA92 442 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 AGPAT5Q9NUQ2 364 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 SEPT9Q9UHD8 586 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-207ENST00000597400 TCEAL9Q9UHQ7 104 aa12.28□□□□□ -0.44
ZNF548-207ENST00000597400 PRG3Q9Y2Y8 225 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-207ENST00000597400 MTF2Q9Y483 593 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-207ENST00000597400 BAHCC1Q9P281 2608 aa12.27□□□□□ -0.44
ZNF548-207ENST00000597400 TICRRQ7Z2Z1 1910 aa12.27□□□□□ -0.44
ZNF548-207ENST00000597400 ESYT2A0FGR8 921 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 ADH1AP07327 375 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 TGM1P22735 817 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 RAB27AP51159 221 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 MRPL10Q7Z7H8 261 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 COLGALT2Q8IYK4 626 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 REXO1Q8N1G1 1221 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 STAMQ92783 540 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NXPE3Q969Y0 559 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 RXFP1Q9HBX9 757 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 FAN1Q9Y2M0 1017 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.45
ZNF548-207ENST00000597400 CACNA1GO43497 2377 aa12.27□□□□□ -0.45
ZNF548-207ENST00000597400 CARNS1A5YM72 827 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 ZBTB43O43298 467 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 TGM5O43548 720 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 SKIP12755 728 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 HOXA11P31270 313 aaPredicted RBP12.26□□□□□ -0.45
ZNF548-207ENST00000597400 GLUD2P49448 558 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 GPC5P78333 572 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 SNW1Q13573 536 aaKnown RBP12.26□□□□□ -0.45
ZNF548-207ENST00000597400 VARS2Q5ST30 1063 aaKnown RBP12.26□□□□□ -0.45
ZNF548-207ENST00000597400 PLA2G4FQ68DD2 849 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 PARM1Q6UWI2 310 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 B3GNT9Q6UX72 402 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 ZNF410Q86VK4 478 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 PALB2Q86YC2 1186 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 GLYCTKQ8IVS8 523 aa12.26□□□□□ -0.45
ZNF548-207ENST00000597400 SMG8Q8ND04 991 aaKnown RBP12.26□□□□□ -0.45
ZNF548-207ENST00000597400 URGCPQ8TCY9 931 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms