RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 RFWD3Q6PCD5 774 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 NSMFQ6X4W1 530 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 TAB3Q8N5C8 712 aaPredicted RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 FGFBP2Q9BYJ0 223 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 HNRNPRO43390 633 aaKnown RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 DCTN3O75935 186 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 DESP17661 470 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 HOMEZQ8IX15 550 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 FAM161BQ96MY7 647 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 USP40Q9NVE5 1235 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 LRRC42Q9Y546 428 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 PVALEFA0A1B0GWK0 134 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 RBAK-RBAKDNI3L0D1 243 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 ATP5HO75947 161 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 USP17L8P0C7I0 530 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 GM2AP17900 193 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 SERPINB3P29508 390 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 MARCKSL1P49006 195 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 KLRC3Q07444 240 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 THOC5Q13769 683 aaKnown RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 CCDC62Q6P9F0 684 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 HIPK4Q8NE63 616 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 CKAP2Q8WWK9 683 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 UTP4Q969X6 686 aaKnown RBP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 VPS37BQ9H9H4 285 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDE4C-211ENST00000597360 ZNF711Q9Y462 761 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 RPTORQ8N122 1335 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 LRRC37A3O60309 1634 aa16.53■□□□□ 0.24
PDE4C-211ENST00000597360 MEIS1O00470 390 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 PDE8AO60658 829 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 STARD3NLO95772 234 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 GNA14O95837 355 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 FAM200BP0CF97 657 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 POLGP54098 1239 aaPredicted RBP16.52■□□□□ 0.24
PDE4C-211ENST00000597360 DHX34Q14147 1143 aaKnown RBP16.52■□□□□ 0.24
PDE4C-211ENST00000597360 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.52■□□□□ 0.24
PDE4C-211ENST00000597360 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 ASAP3Q8TDY4 903 aa16.52■□□□□ 0.24
PDE4C-211ENST00000597360 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.52■□□□□ 0.24
PDE4C-211ENST00000597360 MAGEA13PA6NCF6 341 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 TTC36A6NLP5 189 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 LAD1O00515 517 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 PODXLO00592 558 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 COG7P83436 770 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 PPP1R21Q6ZMI0 780 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 PRUNE1Q86TP1 453 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 PHC3Q8NDX5 983 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 RAD54LQ92698 747 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 KRT35Q92764 455 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 SYN2Q92777 582 aaPredicted RBP16.52■□□□□ 0.23
PDE4C-211ENST00000597360 COA7Q96BR5 231 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 RPS6KL1Q9Y6S9 549 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 ANKRD63C9JTQ0 380 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 DDX3XO00571 662 aaKnown RBP eCLIP16.52■□□□□ 0.23
PDE4C-211ENST00000597360 ATMINO43313 823 aaPredicted RBP16.52■□□□□ 0.23
PDE4C-211ENST00000597360 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.23
PDE4C-211ENST00000597360 THAP2Q9H0W7 228 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 BLOC1S4Q9NUP1 217 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 ALG6Q9Y672 507 aa16.52■□□□□ 0.23
PDE4C-211ENST00000597360 ESRRAP11474 423 aaPredicted RBP16.51■□□□□ 0.23
PDE4C-211ENST00000597360 RARGP13631 454 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 SGO2Q562F6 1265 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 NLRP10Q86W26 655 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 ALG3Q92685 438 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 TMOD3Q9NYL9 352 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 AIPL1Q9NZN9 384 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 PHF2O75151 1096 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 CHRNA3P32297 505 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 LBRQ14739 615 aaKnown RBP16.51■□□□□ 0.23
PDE4C-211ENST00000597360 GALNTL6Q49A17 601 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 DSTYKQ6XUX3 929 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 SLC44A5Q8NCS7 719 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 RFFLQ8WZ73 363 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 OCEL1Q9H607 264 aa16.51■□□□□ 0.23
PDE4C-211ENST00000597360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
PDE4C-211ENST00000597360 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
PDE4C-211ENST00000597360 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 GCNT3O95395 438 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 TROVE2P10155 538 aaKnown RBP eCLIP16.5■□□□□ 0.23
PDE4C-211ENST00000597360 MGAT5Q09328 741 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 MTM1Q13496 603 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 MPP2Q14168 576 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 RNF168Q8IYW5 571 aaPredicted RBP16.5■□□□□ 0.23
PDE4C-211ENST00000597360 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
PDE4C-211ENST00000597360 ARHGEF26Q96DR7 871 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms