RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 TBC1D13Q9NVG8 400 aa12.95□□□□□ -0.34
SYMPK-207ENST00000596824 SPG21Q9NZD8 308 aa12.95□□□□□ -0.34
SYMPK-207ENST00000596824 LRWD1Q9UFC0 647 aa12.95□□□□□ -0.34
SYMPK-207ENST00000596824 INPP5FQ9Y2H2 1132 aa12.95□□□□□ -0.34
SYMPK-207ENST00000596824 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
SYMPK-207ENST00000596824 CNTNAP2Q9UHC6 1331 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 ARHGEF35A5YM69 484 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 GLP2RO95838 553 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 NCLP19338 710 aaKnown RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 BCAR1P56945 870 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 IL17AQ16552 155 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 RILPL1Q5EBL4 403 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 NOMO2Q5JPE7 1267 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 PDE12Q6L8Q7 609 aaKnown RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 NOTUMQ6P988 496 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 PADI6Q6TGC4 694 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 MAEAQ7L5Y9 396 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 RBM23Q86U06 439 aaKnown RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 FAM178BQ8IXR5 827 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 SMG8Q8ND04 991 aaKnown RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 MICAL1Q8TDZ2 1067 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 CCDC51Q96ER9 411 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 CPB2Q96IY4 423 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 EIF2AQ9BY44 585 aaKnown RBP12.94□□□□□ -0.34
SYMPK-207ENST00000596824 RAB34Q9BZG1 259 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 RSAD1Q9HA92 442 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 SMC3Q9UQE7 1217 aa12.94□□□□□ -0.34
SYMPK-207ENST00000596824 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 H3BQV1 296 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 B4GALT5O43286 388 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 B4GALT3O60512 393 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CYP11B2P19099 503 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ALDH7A1P49419 539 aaKnown RBP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 NDUFV1P49821 464 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ATP2C1P98194 919 aaPredicted RBP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 KRT17Q04695 432 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CLUL1Q15846 466 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 DUSP6Q16828 381 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 TMEM173Q86WV6 379 aaPredicted RBP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 SNX29Q8TEQ0 813 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 MSLNLQ96KJ4 702 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 TCF25Q9BQ70 676 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CSRNP2Q9H175 543 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 TLE6Q9H808 572 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CD320Q9NPF0 282 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ENTPD7Q9NQZ7 604 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CLEC1BQ9P126 229 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 CD207Q9UJ71 328 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 KIAA1024Q9UPX6 916 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 IPPQ9Y573 584 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.93□□□□□ -0.34
SYMPK-207ENST00000596824 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 ANK1P16157 1881 aa12.93□□□□□ -0.34
SYMPK-207ENST00000596824 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 PER2O15055 1255 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 INPPL1O15357 1258 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 MBTPS2O43462 519 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 AFF1P51825 1210 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 RBM10P98175 930 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 RNASELQ05823 741 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 SMAD4Q13485 552 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 CUL4AQ13619 759 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 ZNF280BQ86YH2 543 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 VN1R2Q8NFZ6 395 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 URGCPQ8TCY9 931 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 BCL7CQ8WUZ0 217 aaPredicted RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 CDCA3Q99618 268 aaPredicted RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 DDX19AQ9NUU7 478 aaKnown RBP12.92□□□□□ -0.34
SYMPK-207ENST00000596824 FAM50BQ9Y247 325 aa12.92□□□□□ -0.34
SYMPK-207ENST00000596824 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 FSD2A1L4K1 749 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 DDHD2O94830 711 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 GALTP07902 379 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 ITGA4P13612 1032 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 CDC25AP30304 524 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 NAMPTP43490 491 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 SLC11A1P49279 550 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 NCBP1Q09161 790 aaKnown RBP12.91□□□□□ -0.34
SYMPK-207ENST00000596824 COASYQ13057 564 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 KCNC3Q14003 757 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 SMC1AQ14683 1233 aaKnown RBP12.91□□□□□ -0.34
SYMPK-207ENST00000596824 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
SYMPK-207ENST00000596824 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
SYMPK-207ENST00000596824 KRT79Q5XKE5 535 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms