RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 FGFR4P22455 802 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 ZNF76P36508 570 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 USP11P51784 963 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 ORC2Q13416 577 aaPredicted RBP17.2■□□□□ 0.34
FOXA3-202ENST00000594297 TDGQ13569 410 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
FOXA3-202ENST00000594297 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
FOXA3-202ENST00000594297 CCDC149Q6ZUS6 474 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 NIPA1Q7RTP0 329 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 SIX5Q8N196 739 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 TBCKQ8TEA7 893 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 BCL7CQ8WUZ0 217 aaPredicted RBP17.2■□□□□ 0.34
FOXA3-202ENST00000594297 TNFRSF25Q93038 417 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 RTP3Q9BQQ7 232 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 FBXL21Q9UKT6 434 aa17.2■□□□□ 0.34
FOXA3-202ENST00000594297 MAFBQ9Y5Q3 323 aaPredicted RBP17.2■□□□□ 0.34
FOXA3-202ENST00000594297 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 A0A0U1RQF3 1178 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 CTSAP10619 480 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 GCFC2P16383 781 aaKnown RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 ATP2B1P20020 1258 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 EIF4BP23588 611 aaKnown RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 ALDH7A1P49419 539 aaKnown RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 BMS1Q14692 1282 aaKnown RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 INF2Q27J81 1249 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 CABP7Q86V35 215 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 TMEM87AQ8NBN3 555 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 ACSF2Q96CM8 615 aaPredicted RBP17.19■□□□□ 0.34
FOXA3-202ENST00000594297 SFXN1Q9H9B4 322 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 IRAK3Q9Y616 596 aa17.19■□□□□ 0.34
FOXA3-202ENST00000594297 IPO5O00410 1097 aaKnown RBP17.18■□□□□ 0.34
FOXA3-202ENST00000594297 NARSO43776 548 aaKnown RBP17.18■□□□□ 0.34
FOXA3-202ENST00000594297 MARCH6O60337 910 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 GPC3P51654 580 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 EFCAB12Q6NXP0 572 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 GPR149Q86SP6 731 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 KCNK12Q9HB15 430 aa17.18■□□□□ 0.34
FOXA3-202ENST00000594297 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 LMNAP02545 664 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 DARSP14868 501 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 STK38Q15208 465 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 PTPN14Q15678 1187 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 ZNF746Q6NUN9 644 aaPredicted RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 MOXD1Q6UVY6 613 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 DGLUCYQ7Z3D6 616 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 DDX53Q86TM3 631 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 KIAA2013Q8IYS2 634 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 KCNG4Q8TDN1 519 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 IGSF21Q96ID5 467 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 SPATA32Q96LK8 384 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 SCLT1Q96NL6 688 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 VN1R3Q9BXE9 311 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
FOXA3-202ENST00000594297 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 R4GN57 208 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 WDR87Q6ZQQ6 2873 aa17.17■□□□□ 0.34
FOXA3-202ENST00000594297 FRYLO94915 3013 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 LAD1O00515 517 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 MAGEB2O15479 319 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
FOXA3-202ENST00000594297 YEATS4O95619 227 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 PTMSP20962 102 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 CEBPZQ03701 1054 aaKnown RBP17.16■□□□□ 0.34
FOXA3-202ENST00000594297 GIT2Q14161 759 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 PPP4R3AQ6IN85 833 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 FAM173BQ6P4H8 233 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 CLEC17AQ6ZS10 378 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 SMAP1Q8IYB5 467 aaPredicted RBP17.16■□□□□ 0.34
FOXA3-202ENST00000594297 CRYGNQ8WXF5 182 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 LPPQ93052 612 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
FOXA3-202ENST00000594297 FANCMQ8IYD8 2048 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 KRBA1A5PL33 1030 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 B4GALT3O60512 393 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 N4BP1O75113 896 aaKnown RBP17.15■□□□□ 0.34
FOXA3-202ENST00000594297 CSDE1O75534 798 aaKnown RBP17.15■□□□□ 0.34
FOXA3-202ENST00000594297 PSAPP07602 524 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 CFHP08603 1231 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 CYP3A4P08684 503 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 TMOD1P28289 359 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
FOXA3-202ENST00000594297 FAM167AQ96KS9 214 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 NRDE2Q9H7Z3 1164 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 TBC1D13Q9NVG8 400 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
FOXA3-202ENST00000594297 TCEAL9Q9UHQ7 104 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms