RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 CNTNAP2Q9UHC6 1331 aa18.33■□□□□ 0.53
SYMPK-204ENST00000593959 POTEMA6NI47 508 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 GALTP07902 379 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 AXLP30530 894 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 TRAPPC10P48553 1259 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.52
SYMPK-204ENST00000593959 AMHR2Q16671 573 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 TMEM173Q86WV6 379 aaPredicted RBP18.33■□□□□ 0.52
SYMPK-204ENST00000593959 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 CCDC51Q96ER9 411 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 POLR3CQ9BUI4 534 aaPredicted RBP18.33■□□□□ 0.52
SYMPK-204ENST00000593959 S1PR5Q9H228 398 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 NRDE2Q9H7Z3 1164 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 TUFT1Q9NNX1 390 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 BMP2KQ9NSY1 1161 aaPredicted RBP18.33■□□□□ 0.52
SYMPK-204ENST00000593959 ARID2Q68CP9 1835 aa18.33■□□□□ 0.52
SYMPK-204ENST00000593959 C2orf71A6NGG8 1288 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 LOC730098B7Z3J9 87 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 DCXO43602 365 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 B4GALT3O60512 393 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 TSPAN1O60635 241 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 NCLP19338 710 aaKnown RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 U2AF2P26368 475 aaKnown RBP eCLIP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 MCM7P33993 719 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 FOSBP53539 338 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 CAPSQ13938 189 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 SMC1AQ14683 1233 aaKnown RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 PLPP4Q5VZY2 271 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 DDX53Q86TM3 631 aaKnown RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 SMG8Q8ND04 991 aaKnown RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 CNNM3Q8NE01 707 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 ASAP3Q8TDY4 903 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 PIGOQ8TEQ8 1089 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 IGSF21Q96ID5 467 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
SYMPK-204ENST00000593959 DBR1Q9UK59 544 aaKnown RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 USP15Q9Y4E8 981 aaPredicted RBP18.32■□□□□ 0.52
SYMPK-204ENST00000593959 PRR33A8MZF0 331 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 NT5C1B-RDH14C9J2C7 533 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 HOXB8P17481 243 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-204ENST00000593959 GLRA2P23416 452 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 RPA1P27694 616 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
SYMPK-204ENST00000593959 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 TFDP1Q14186 410 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 HERC4Q5GLZ8 1057 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-204ENST00000593959 ANKRD54Q6NXT1 300 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 SYCE2Q6PIF2 218 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 ZNF280BQ86YH2 543 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 BCL7CQ8WUZ0 217 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-204ENST00000593959 TMEM169Q96HH4 297 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 ZBP1Q9H171 429 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 UBN1Q9NPG3 1134 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 KANSL3Q9P2N6 904 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 RAPGEFL1Q9UHV5 662 aa18.31■□□□□ 0.52
SYMPK-204ENST00000593959 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYMPK-204ENST00000593959 MED24O75448 989 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 OR52Z1P0C646 297 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 MUTP22033 750 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 LONRF3Q496Y0 759 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 NACC1Q96RE7 527 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 VN1R3Q9BXE9 311 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 RSAD1Q9HA92 442 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 DNAJB4Q9UDY4 337 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 STK39Q9UEW8 545 aa18.3■□□□□ 0.52
SYMPK-204ENST00000593959 DDHD2O94830 711 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 ERLIN2O94905 339 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 EFEMP2O95967 443 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 SRGAP2BP0DMP2 458 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 CTSAP10619 480 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 ATP2B1P20020 1258 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 SLC11A1P49279 550 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 GIT2Q14161 759 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 ZNF174Q15697 407 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 NOTUMQ6P988 496 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 RNF135Q8IUD6 432 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 VPS52Q8N1B4 723 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 TMEM175Q9BSA9 504 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 PHF7Q9BWX1 381 aaPredicted RBP18.29■□□□□ 0.52
SYMPK-204ENST00000593959 CSRNP2Q9H175 543 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 IPPQ9Y573 584 aa18.29■□□□□ 0.52
SYMPK-204ENST00000593959 A0A087WWV3 80 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 INO80B-WBP1J3KQ70 363 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 CXCL14O95715 111 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 ARF4P18085 180 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 TECP42680 631 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 TOB1P50616 345 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 NCBP1Q09161 790 aaKnown RBP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 CDCA2Q69YH5 1023 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-204ENST00000593959 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 MCPH1Q8NEM0 835 aa18.28■□□□□ 0.52
SYMPK-204ENST00000593959 URGCPQ8TCY9 931 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms