RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NPHP3-ACAD11A0A0J9YXS1 232 aa21.62■■□□□ 1.05
LSM4-203ENST00000593829 KRT18P05783 430 aaKnown RBP21.62■■□□□ 1.05
LSM4-203ENST00000593829 DMP1Q13316 513 aaPredicted RBP21.62■■□□□ 1.05
LSM4-203ENST00000593829 ADALQ6DHV7 355 aa21.62■■□□□ 1.05
LSM4-203ENST00000593829 TIFAQ96CG3 184 aa21.62■■□□□ 1.05
LSM4-203ENST00000593829 ODF2LQ9ULJ1 636 aa21.62■■□□□ 1.05
LSM4-203ENST00000593829 YBX2Q9Y2T7 364 aaKnown RBP21.62■■□□□ 1.05
LSM4-203ENST00000593829 C9IYK1 514 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 STAG3L1P0CL83 205 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 MYOGP15173 224 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 PEX3P56589 373 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 NCBP1Q09161 790 aaKnown RBP21.61■■□□□ 1.05
LSM4-203ENST00000593829 NPAS4Q8IUM7 802 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 REEP2Q9BRK0 252 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 KCNG1Q9UIX4 513 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 LRFN2Q9ULH4 789 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 INSL6Q9Y581 213 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 TCHHQ07283 1943 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 CCDC169A6NNP5 214 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 SFI1A8K8P3 1242 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 NPTX2P47972 431 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 FAM189BP81408 668 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 TWF2Q6IBS0 349 aaKnown RBP21.61■■□□□ 1.05
LSM4-203ENST00000593829 CRIPAKQ8N1N5 446 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 IQUBQ8NA54 791 aa21.61■■□□□ 1.05
LSM4-203ENST00000593829 CCDC94Q9BW85 323 aaPredicted RBP21.61■■□□□ 1.05
LSM4-203ENST00000593829 PRMT7Q9NVM4 692 aaPredicted RBP21.61■■□□□ 1.05
LSM4-203ENST00000593829 PLS3P13797 630 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 IBSPP21815 317 aaPredicted RBP21.6■■□□□ 1.05
LSM4-203ENST00000593829 AXLP30530 894 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 EFNA5P52803 228 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 HTRA4P83105 476 aaPredicted RBP21.6■■□□□ 1.05
LSM4-203ENST00000593829 CACNB1Q02641 598 aaPredicted RBP21.6■■□□□ 1.05
LSM4-203ENST00000593829 GIT2Q14161 759 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 YME1L1Q96TA2 773 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 KIFC3Q9BVG8 833 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 NKX2-4Q9H2Z4 354 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 CUEDC2Q9H467 287 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 PCDHB7Q9Y5E2 793 aa21.6■■□□□ 1.05
LSM4-203ENST00000593829 TSPAN1O60635 241 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 CMA1P23946 247 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 HOXA11P31270 313 aaPredicted RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 E2F4Q16254 413 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 DHX58Q96C10 678 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 TRAIPQ9BWF2 469 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 FZD8Q9H461 694 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 SLC28A3Q9HAS3 691 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 KMT5AQ9NQR1 393 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 LARSQ9P2J5 1176 aaKnown RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 TTC3P53804 2025 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 TMEM265A0A087WTH1 108 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 A0A0U1RQF3 1178 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 POLR2DO15514 142 aaKnown RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 CA3P07451 260 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 MAPK6Q16659 721 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 AMHR2Q16671 573 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 FAM187BQ17R55 369 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 PPP4R3CPQ6ZMV5 832 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 SPIRE2Q8WWL2 714 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 PYM1Q9BRP8 204 aaKnown RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 NTPCRQ9BSD7 190 aaKnown RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 ELAC1Q9H777 363 aaKnown RBP21.59■■□□□ 1.05
LSM4-203ENST00000593829 TMEM161AQ9NX61 479 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 KCNH3Q9ULD8 1083 aa21.59■■□□□ 1.05
LSM4-203ENST00000593829 ADGRA3Q8IWK6 1321 aa21.58■■□□□ 1.05
LSM4-203ENST00000593829 TBCAO75347 108 aaKnown RBP21.58■■□□□ 1.04
LSM4-203ENST00000593829 FAM13AO94988 1023 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 SMTNP53814 917 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 ZNF697Q5TEC3 545 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 NOTUMQ6P988 496 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 ECHDC2Q86YB7 292 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 CCDC113Q9H0I3 377 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 GBF1Q92538 1859 aa21.58■■□□□ 1.04
LSM4-203ENST00000593829 MYMKA6NI61 221 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 SKIP12755 728 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 ZNF131P52739 623 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 DNTTIP2Q5QJE6 756 aaKnown RBP21.57■■□□□ 1.04
LSM4-203ENST00000593829 DDX12PQ92771 950 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 CCDC51Q96ER9 411 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 TNMDQ9H2S6 317 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 PARVGQ9HBI0 331 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 ARHGAP28Q9P2N2 729 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 PHLPP2Q6ZVD8 1323 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 LCHNA4D1U4 455 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 K7ERI5 159 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 DGKIO75912 1065 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 PRKCBP05771 671 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 ARF4P18085 180 aaPredicted RBP21.57■■□□□ 1.04
LSM4-203ENST00000593829 LIG1P18858 919 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 RAB27AP51159 221 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 PPP2R2DQ66LE6 453 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 DYMQ7RTS9 669 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 MYCT1Q8N699 235 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 CPB2Q96IY4 423 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 ZHX3Q9H4I2 956 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 FAM105AQ9NUU6 356 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 PRDM4Q9UKN5 801 aa21.57■■□□□ 1.04
LSM4-203ENST00000593829 A0A1B0GVL5 298 aa21.56■■□□□ 1.04
LSM4-203ENST00000593829 A0A1W2PQ27 194 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms