RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MTRQ99707 1265 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 C7orf25Q9BPX7 421 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 BMP2KQ9NSY1 1161 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-219ENST00000592927 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
DDX39A-219ENST00000592927 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 M0R296 226 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 CAND2O75155 1236 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 IQCF3P0C7M6 154 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 CKBP12277 381 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 CYP11B2P19099 503 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 KCNJ6P48051 423 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 SLC12A3P55017 1021 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 MCM6Q14566 821 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 IER5Q5VY09 327 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 CNNM4Q6P4Q7 775 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 TRIM67Q6ZTA4 783 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 ASCL5Q7RTU5 278 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 LINC01465Q8N7H1 131 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 MCPH1Q8NEM0 835 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 TCP11Q8WWU5 503 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 SUCLA2Q9P2R7 463 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-219ENST00000592927 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
DDX39A-219ENST00000592927 LINC01553A4QN01 128 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 M0QZ92 97 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 SELPP16109 830 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 RBL2Q08999 1139 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 TMEM62Q0P6H9 643 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-219ENST00000592927 MORC3Q14149 939 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 KCNB1Q14721 858 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 ZNF618Q5T7W0 954 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 FAM102BQ5T8I3 360 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 RINT1Q6NUQ1 792 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
DDX39A-219ENST00000592927 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-219ENST00000592927 XPNPEP1Q9NQW7 623 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 KCND2Q9NZV8 630 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 MAN1B1Q9UKM7 699 aa13.12□□□□□ -0.31
DDX39A-219ENST00000592927 BRWD1Q9NSI6 2320 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 VTNP04004 478 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RPN1P04843 607 aaKnown RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 CTSHP09668 335 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 ZNF165P49910 485 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 WDR5P61964 334 aaKnown RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 DRP2Q13474 957 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 CUL4BQ13620 913 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 LRRC8DQ7L1W4 858 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RHPN2Q8IUC4 686 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 FBXL6Q8N531 539 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 PRPF31Q8WWY3 499 aaKnown RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RAD9AQ99638 391 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 TIPINQ9BVW5 301 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 TRIM9Q9C026 710 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-219ENST00000592927 DNAJC25Q9H1X3 360 aa13.11□□□□□ -0.31
DDX39A-219ENST00000592927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-219ENST00000592927 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 H0Y858 1186 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 BIN1O00499 593 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 ASAP2O43150 1006 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
DDX39A-219ENST00000592927 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 ARL2P36404 184 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
DDX39A-219ENST00000592927 DEFB103AP81534 67 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 RAD51AP2Q09MP3 1159 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
DDX39A-219ENST00000592927 FAM26DQ5JW98 314 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 STAMQ92783 540 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 KIFAP3Q92845 792 aa13.1□□□□□ -0.31
DDX39A-219ENST00000592927 MRPL38Q96DV4 380 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms