RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 EIF1ADQ8N9N8 165 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 SENP7Q9BQF6 1050 aa17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 DIS3Q9Y2L1 958 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 IGSF9BQ9UPX0 1349 aa17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 KRIT1O00522 736 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 RPS6KA5O75582 802 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 PPATQ06203 517 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 AP1M1Q9BXS5 423 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 ISCUQ9H1K1 167 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 TAS2R14Q9NYV8 317 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 TBX20Q9UMR3 447 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 PCDHA10Q9Y5I2 948 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 MAFGO15525 162 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 IVLP07476 585 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 FAM153BP0C7A2 387 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 CUL1Q13616 776 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 FAM153CQ494X1 144 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 VSIG10LQ86VR7 867 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 MAP4K3Q8IVH8 894 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 ZNF280CQ8ND82 737 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 TMEM161BQ8NDZ6 487 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 ZSWIM2Q8NEG5 633 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 PLEKHO2Q8TD55 490 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 SLC20A1Q8WUM9 679 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 ARHGEF26Q96DR7 871 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 TMEM117Q9H0C3 514 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 THAP2Q9H0W7 228 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 TAF1DQ9H5J8 278 aaPredicted RBP17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 PICK1Q9NRD5 415 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 FAM153AQ9UHL3 310 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 USP20Q9Y2K6 914 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 RIPK3Q9Y572 518 aa17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
PRKCSH-217ENST00000592741 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 DKC1O60832 514 aaKnown RBP eCLIP17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 ADRB2P07550 413 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 NR3C2P08235 984 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 OAZ1P54368 228 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 CFAP58Q5T655 872 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 SNRNP48Q6IEG0 339 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 RHOT2Q8IXI1 618 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 KIFAP3Q92845 792 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 ZIM3Q96PE6 472 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 CNOT7Q9UIV1 285 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 TTC7AQ9ULT0 858 aaPredicted RBP17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 NPTX2P47972 431 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 GUCY2FP51841 1108 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 SNRNP35Q16560 246 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 ANO5Q75V66 913 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 PALB2Q86YC2 1186 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 REPS2Q8NFH8 660 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 ATP6V0A1Q93050 837 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 SLITRK6Q9H5Y7 841 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 KMT5AQ9NQR1 393 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 ZNF112Q9UJU3 913 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 PHIPQ8WWQ0 1821 aa17.92■□□□□ 0.46
PRKCSH-217ENST00000592741 SART1O43290 800 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 MCCD1P59942 119 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 ERVK-9P63128 1117 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 CCDC26Q8TAB7 109 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 NSUN6Q8TEA1 469 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 SPIRE2Q8WWL2 714 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 CEP170P1Q96L14 293 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 C17orf75Q9HAS0 396 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 GABBR1Q9UBS5 961 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 PFASO15067 1338 aa17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 BRCA1P38398 1863 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-217ENST00000592741 DENND3A2RUS2 1198 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 ANKRD63C9JTQ0 380 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 DDX3YO15523 660 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 PTPRAP18433 802 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 DSG3P32926 999 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 USP8P40818 1118 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 HADHBP55084 474 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 HLTFQ14527 1009 aaKnown RBP eCLIP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 CBWD2Q8IUF1 395 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 WRNIP1Q96S55 665 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 KIFC3Q9BVG8 833 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 DDX47Q9H0S4 455 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 COL11A1P12107 1806 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 PSAPP07602 524 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 ADSSP30520 456 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 MFAP3P55082 362 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 KRT39Q6A163 491 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 MAATS1Q7Z4T9 603 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 ZKSCAN4Q969J2 545 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 SAAL1Q96ER3 474 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 NAP1L3Q99457 506 aaPredicted RBP17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 CARD9Q9H257 536 aa17.9■□□□□ 0.46
PRKCSH-217ENST00000592741 ZBTB7AO95365 584 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms