RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GPC2Q8N158 579 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 DCTN3O75935 186 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 GGPS1O95749 300 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 CA4P22748 312 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 BASP1P80723 227 aaKnown RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 MAPK6Q16659 721 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 DARS2Q6PI48 645 aaKnown RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 TBC1D1Q86TI0 1168 aaPredicted RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 REXO1L1PQ8IX06 675 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 NME8Q8N427 588 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 KCTD6Q8NC69 237 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
DNMT1-228ENST00000592705 RFFLQ8WZ73 363 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 DIP2AQ14689 1571 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 PFASO15067 1338 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 KIDINS220Q9ULH0 1771 aa13.59□□□□□ -0.23
DNMT1-228ENST00000592705 ITSN1Q15811 1721 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 POTEFA5A3E0 1075 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 POTEIP0CG38 1075 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 CDC42EP1Q00587 391 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 CHADLQ6NUI6 762 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 POTEGQ6S5H5 508 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 USP49Q70CQ1 688 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 USP50Q70EL3 339 aaPredicted RBP13.58□□□□□ -0.23
DNMT1-228ENST00000592705 PITPNM3Q9BZ71 974 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 ANAPC7Q9UJX3 599 aa13.58□□□□□ -0.23
DNMT1-228ENST00000592705 RECQLP46063 649 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 OSTNP61366 133 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 DYNLT1P63172 113 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SPARCL1Q14515 664 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PTPAQ15257 358 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PADI6Q6TGC4 694 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SCYL1Q96KG9 808 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 IQANK1A0A1B0GTG1 560 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PDXKO00764 312 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SLC26A4O43511 780 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 UPP2O95045 317 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 DHX34Q14147 1143 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 E2F4Q16254 413 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SLC18A3Q16572 532 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 BEND6Q5SZJ8 279 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PDIK1LQ8N165 341 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PYROXD1Q8WU10 500 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SENP2Q9HC62 589 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 KIAA1586Q9HCI6 787 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PDS5AQ29RF7 1337 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 ZNF185O15231 689 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 GH1P01241 217 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 CIITAP33076 1130 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SERPINB6P35237 376 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 HDLBPQ00341 1268 aaKnown RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 NOGQ13253 232 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 RCN2Q14257 317 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 TAF11Q15544 211 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 SRLQ86TD4 932 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 DYDC2Q96IM9 177 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 WNT8AQ9H1J5 351 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 PACSIN2Q9UNF0 486 aaPredicted RBP13.58□□□□□ -0.24
DNMT1-228ENST00000592705 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
DNMT1-228ENST00000592705 GOLGA8QA0A0J9YX86 632 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 GOLGA8OA6NCC3 632 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 PPP1R3GB7ZBB8 358 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 GOLGA8NF8WBI6 632 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ATP5HO75947 161 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 SOX5P35711 763 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 NOP53Q9NZM5 478 aaKnown RBP13.57□□□□□ -0.24
DNMT1-228ENST00000592705 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 SLC16A3O15427 465 aaKnown RBP13.57□□□□□ -0.24
DNMT1-228ENST00000592705 GCLMP48507 274 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 QRICH1Q2TAL8 776 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 IER5Q5VY09 327 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 CEP120Q8N960 986 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 HPCAL4Q9UM19 191 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 MUM1L1Q5H9M0 696 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ZNF564Q8TBZ8 553 aaPredicted RBP13.57□□□□□ -0.24
DNMT1-228ENST00000592705 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 MAP3K14Q99558 947 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 AGPAT5Q9NUQ2 364 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 ZRANB2O95218 330 aaKnown RBP eCLIP13.57□□□□□ -0.24
DNMT1-228ENST00000592705 NNMTP40261 264 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 VAMP7P51809 220 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 INHBEP58166 350 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 RPS6KA2Q15349 733 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 SAYSD1Q9NPB0 183 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 FBXL5Q9UKA1 691 aa13.57□□□□□ -0.24
DNMT1-228ENST00000592705 SYNJ2BP-COX16A0A087WUM0 186 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms