RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 APBB1IPQ7Z5R6 666 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 LRRC43Q8N309 656 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 MICAL1Q8TDZ2 1067 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 CLP1Q92989 425 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 LPPQ93052 612 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 CLIC6Q96NY7 704 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 CASD1Q96PB1 797 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 FAM193BQ96PV7 902 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 ADPGKQ9BRR6 497 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 RUSC1Q9BVN2 902 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 APOL6Q9BWW8 343 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 MRPL9Q9BYD2 267 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 NFKBIZQ9BYH8 718 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 ZHX3Q9H4I2 956 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 RC3H2Q9HBD1 1191 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 UBN1Q9NPG3 1134 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 PARP2Q9UGN5 583 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 PUF60Q9UHX1 559 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 N4BP3O15049 544 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 B4GALT5O43286 388 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 ZNF623O75123 536 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 FAM13AO94988 1023 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 NPTXRO95502 500 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 ARF4P18085 180 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 PLCG1P19174 1290 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 ALDH7A1P49419 539 aaKnown RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 KRT17Q04695 432 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 MCM6Q14566 821 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 NOMO2Q5JPE7 1267 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 TJAP1Q5JTD0 557 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 KLHL23Q8NBE8 558 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 RSPH1Q8WYR4 309 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 EPSTI1Q96J88 318 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 PRIMPOLQ96LW4 560 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 TRAIPQ9BWF2 469 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 PANK2Q9BZ23 570 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 LMAN2LQ9H0V9 348 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 RSAD1Q9HA92 442 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 C17orf75Q9HAS0 396 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 ALG13Q9NP73 1137 aaKnown RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 KCND2Q9NZV8 630 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
BRCA1-227ENST00000591849 REV3LO60673 3130 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
BRCA1-227ENST00000591849 PHLPP2Q6ZVD8 1323 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 GRM6O15303 877 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 LPXNO60711 386 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 TBCAO75347 108 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 POU3F3P20264 500 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 GUCY2CP25092 1073 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 DDIT3P35638 169 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 PPM1AP35813 382 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 NPTX2P47972 431 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 NASPP49321 788 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 SLC12A3P55017 1021 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 STRN3Q13033 797 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 BMS1Q14692 1282 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 CLLU1OSQ5K130 101 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 CDCA2Q69YH5 1023 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 CCDC73Q6ZRK6 1079 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 SV2BQ7L1I2 683 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 MRPL10Q7Z7H8 261 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 CDR2LQ86X02 465 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 MYCT1Q8N699 235 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 COLGALT1Q8NBJ5 622 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 LINC00301Q8NCQ3 95 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 LARP4BQ92615 738 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 RAD54LQ92698 747 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 P2RX5Q93086 422 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 MRPL38Q96DV4 380 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 TCHPQ9BT92 498 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 KIFC3Q9BVG8 833 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 EIF2AQ9BY44 585 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 FZD8Q9H461 694 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 LARSQ9P2J5 1176 aaKnown RBP11.1□□□□□ -0.63
BRCA1-227ENST00000591849 KANSL3Q9P2N6 904 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 IPPQ9Y573 584 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
BRCA1-227ENST00000591849 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms