RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 P4HBP07237 508 aaKnown RBP11.66□□□□□ -0.54
VPS4B-207ENST00000591519 SRGAP2BP0DMP2 458 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 PHKA2P46019 1235 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 ALDH7A1P49419 539 aaKnown RBP11.66□□□□□ -0.54
VPS4B-207ENST00000591519 STK3Q13188 491 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 ANKRD54Q6NXT1 300 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 Q6ZNB5 142 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 HFE2Q6ZVN8 426 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 TMC7Q7Z402 723 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 HAS1Q92839 578 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 MFSD14AQ96MC6 490 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 SH2D3AQ9BRG2 576 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 MRPL9Q9BYD2 267 aaKnown RBP11.66□□□□□ -0.54
VPS4B-207ENST00000591519 IFT122Q9HBG6 1241 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 CCDC194A0A1B0GVG4 234 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 C2orf71A6NGG8 1288 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 XBP1P17861 261 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS4B-207ENST00000591519 PBX3P40426 434 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 BCAR1P56945 870 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 ZXDAP98168 799 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 EPHA7Q15375 998 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 LETM2Q2VYF4 491 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 PLPP4Q5VZY2 271 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 TRIM67Q6ZTA4 783 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 RHPN2Q8IUC4 686 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 C4orf19Q8IY42 314 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 RNF169Q8NCN4 708 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 HELQQ8TDG4 1101 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 NAP1L4Q99733 375 aaKnown RBP11.65□□□□□ -0.54
VPS4B-207ENST00000591519 SLKQ9H2G2 1235 aaPredicted RBP11.65□□□□□ -0.54
VPS4B-207ENST00000591519 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
VPS4B-207ENST00000591519 ENTPD7Q9NQZ7 604 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 FAM105AQ9NUU6 356 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 TPCN1Q9ULQ1 816 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 IRAK3Q9Y616 596 aa11.65□□□□□ -0.54
VPS4B-207ENST00000591519 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.55
VPS4B-207ENST00000591519 TRIOO75962 3097 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 ASAP2O43150 1006 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 OFD1O75665 1012 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 CTDNEP1O95476 244 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 RFC5P40937 340 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 TECP42680 631 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 RAB27AP51159 221 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 POLGP54098 1239 aaPredicted RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 NPEPPSP55786 919 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 ANAPC15P60006 121 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 GIT2Q14161 759 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 TWF2Q6IBS0 349 aaKnown RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 NUDT18Q6ZVK8 323 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 MRPL10Q7Z7H8 261 aaKnown RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 KSR1Q8IVT5 923 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 SLC7A3Q8WY07 619 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 CASP10Q92851 521 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 CEP170P1Q96L14 293 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
VPS4B-207ENST00000591519 WRAP73Q9P2S5 460 aaPredicted RBP11.64□□□□□ -0.55
VPS4B-207ENST00000591519 PIEZO1Q92508 2521 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 TMEM221A6NGB7 291 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 M0R296 226 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 CCNT1O60563 726 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 CLASP2O75122 1294 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 CXCL14O95715 111 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 GALTP07902 379 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 FDPSP14324 419 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 ITIH3Q06033 890 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 SPIRE1Q08AE8 756 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 NOMO2Q5JPE7 1267 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 EARS2Q5JPH6 523 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 PLA2G4FQ68DD2 849 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 CATSPER4Q7RTX7 472 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 SRGAP1Q7Z6B7 1085 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 DDX53Q86TM3 631 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 PRPF31Q8WWY3 499 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 WASF1Q92558 559 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 PGBD4Q96DM1 585 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 TMEM169Q96HH4 297 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 IGSF21Q96ID5 467 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 RPGRIP1Q96KN7 1286 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 NLRP4Q96MN2 994 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 ADAM7Q9H2U9 754 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 NRDE2Q9H7Z3 1164 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
VPS4B-207ENST00000591519 GJB4Q9NTQ9 266 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
VPS4B-207ENST00000591519 TBC1D13Q9NVG8 400 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms