RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
MBD3-207ENST00000590550 COL11A2P13942 1736 aaPredicted RBP20.74■□□□□ 0.91
MBD3-207ENST00000590550 PHF20L1A8MW92 1017 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 HMGB1P1B2RPK0 211 aaPredicted RBP20.74■□□□□ 0.91
MBD3-207ENST00000590550 FERP16591 822 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 GAP43P17677 238 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 XRCC4Q13426 336 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 DCAF12L1Q5VU92 463 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 AADACL2Q6P093 401 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 YIPF3Q9GZM5 350 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 THAP2Q9H0W7 228 aa20.74■□□□□ 0.91
MBD3-207ENST00000590550 CAPRIN2Q6IMN6 1127 aaKnown RBP20.73■□□□□ 0.91
MBD3-207ENST00000590550 SLFN11Q7Z7L1 901 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 SLC30A5Q8TAD4 765 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 ZNF577Q9BSK1 485 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 INTS2Q9H0H0 1204 aaKnown RBP20.73■□□□□ 0.91
MBD3-207ENST00000590550 CPSF2Q9P2I0 782 aaKnown RBP20.73■□□□□ 0.91
MBD3-207ENST00000590550 FBXL5Q9UKA1 691 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 CTNNA1P35221 906 aaKnown RBP20.73■□□□□ 0.91
MBD3-207ENST00000590550 PHLDB3Q6NSJ2 640 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 BTNL9Q6UXG8 535 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 HS2ST1Q7LGA3 356 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 SYCP3Q8IZU3 236 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 ZSWIM2Q8NEG5 633 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 SLC20A1Q8WUM9 679 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 SCAF8Q9UPN6 1271 aaKnown RBP20.73■□□□□ 0.91
MBD3-207ENST00000590550 TRPC6Q9Y210 931 aa20.73■□□□□ 0.91
MBD3-207ENST00000590550 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 EXOC3O60645 756 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 PRELPP51888 382 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 BYSLQ13895 437 aaKnown RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 KRT27Q7Z3Y8 459 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 LXNQ9BS40 222 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 GLIS2Q9BZE0 524 aaPredicted RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 FRMD4BQ9Y2L6 1034 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 PIK3CDO00329 1044 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 FOXN3O00409 490 aaPredicted RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 ANP32DO95626 131 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 THEMIS2Q5TEJ8 643 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 CDCA2Q69YH5 1023 aaPredicted RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 CCDC26Q8TAB7 109 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 HES6Q96HZ4 224 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 STK33Q9BYT3 514 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 TUFT1Q9NNX1 390 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 TMOD4Q9NZQ9 345 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 SUCLA2Q9P2R7 463 aaPredicted RBP20.72■□□□□ 0.91
MBD3-207ENST00000590550 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 COG5Q9UP83 839 aa20.72■□□□□ 0.91
MBD3-207ENST00000590550 CEP55Q53EZ4 464 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 ZNF746Q6NUN9 644 aaPredicted RBP20.71■□□□□ 0.91
MBD3-207ENST00000590550 MIGA2Q7L4E1 593 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 CPLX4Q7Z7G2 160 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 SLC5A5Q92911 643 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 AMFRQ9UKV5 643 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 GTPBP10A4D1E9 387 aaKnown RBP20.71■□□□□ 0.91
MBD3-207ENST00000590550 CES2O00748 559 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 EIF3DO15371 548 aaKnown RBP eCLIP20.71■□□□□ 0.91
MBD3-207ENST00000590550 TRAPPC3O43617 180 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 HIP1RO75146 1068 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 MYL7Q01449 175 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 ZNF844Q08AG5 666 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 CTNNBL1Q8WYA6 563 aaPredicted RBP20.71■□□□□ 0.91
MBD3-207ENST00000590550 ERVK-5Q9HDB9 667 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 ACP6Q9NPH0 428 aa20.71■□□□□ 0.91
MBD3-207ENST00000590550 TMEM150BA6NC51 233 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 UPP2O95045 317 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 PPP2R5CQ13362 524 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 DAW1Q8N136 415 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 GLG1Q92896 1179 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 ELMO3Q96BJ8 720 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 FRMPD4Q14CM0 1322 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 TMEM110-MUSTN1A8MSY1 372 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 H0YGN5 161 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 CUL1Q13616 776 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 EMC10Q5UCC4 262 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 CD302Q8IX05 232 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 ARFGAP2Q8N6H7 521 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 TMBIM4Q9HC24 238 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 APEX2Q9UBZ4 518 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 C15orf41Q9Y2V0 281 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 NFS1Q9Y697 457 aa20.7■□□□□ 0.9
MBD3-207ENST00000590550 YDJCA8MPS7 323 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 MYZAPP0CAP1 466 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 TBC1D1Q86TI0 1168 aaPredicted RBP20.69■□□□□ 0.9
MBD3-207ENST00000590550 RFFLQ8WZ73 363 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 ALG3Q92685 438 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 IRAK4Q9NWZ3 460 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 TNFAIP3P21580 790 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 SYCE1Q8N0S2 351 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 RASGEF1CQ8N431 466 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 RAPGEF5Q92565 580 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 KAT5Q92993 513 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 MRIQ9BWK5 157 aa20.69■□□□□ 0.9
MBD3-207ENST00000590550 A0A0A6YYK5 440 aaPredicted RBP20.68■□□□□ 0.9
MBD3-207ENST00000590550 ARHGEF35A5YM69 484 aa20.68■□□□□ 0.9
MBD3-207ENST00000590550 K7ENM7 598 aa20.68■□□□□ 0.9
MBD3-207ENST00000590550 IPO5O00410 1097 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms