RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 IPPQ9Y573 584 aa20.17■□□□□ 0.82
DDX39A-212ENST00000590260 A0A1B0GUA9 196 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 ERLIN2O94905 339 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 CSPG5O95196 566 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
DDX39A-212ENST00000590260 AXLP30530 894 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 LONP1P36776 959 aaKnown RBP20.16■□□□□ 0.82
DDX39A-212ENST00000590260 KARSQ15046 597 aaKnown RBP20.16■□□□□ 0.82
DDX39A-212ENST00000590260 NAALADL2Q58DX5 795 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 TCEAL5Q5H9L2 206 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 EPSTI1Q96J88 318 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 LMAN2LQ9H0V9 348 aa20.16■□□□□ 0.82
DDX39A-212ENST00000590260 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-212ENST00000590260 MORC2Q9Y6X9 1032 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-212ENST00000590260 NPHP3-ACAD11A0A0J9YXS1 232 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 SFI1A8K8P3 1242 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 PLA2G4BP0C869 781 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 SKIP12755 728 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 PLCG1P19174 1290 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 GUCY2CP25092 1073 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 NASPP49321 788 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 COL19A1Q14993 1142 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 FOXD4L5Q5VV16 416 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 NOTUMQ6P988 496 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 TMEM173Q86WV6 379 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 POF1BQ8WVV4 589 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 FOXD4L4Q8WXT5 416 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 KIFAP3Q92845 792 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 NT5C3AQ9H0P0 336 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 NXF3Q9H4D5 531 aaKnown RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 TBC1D13Q9NVG8 400 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 MIOSQ9NXC5 875 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 THEGQ9P2T0 379 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 SRPRBQ9Y5M8 271 aaKnown RBP20.15■□□□□ 0.82
DDX39A-212ENST00000590260 CNTNAP2Q9UHC6 1331 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 VCANP13611 3396 aa20.15■□□□□ 0.82
DDX39A-212ENST00000590260 A0A0C4DFX4 3053 aa20.14■□□□□ 0.82
DDX39A-212ENST00000590260 FGF18O76093 207 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 NPTX2P47972 431 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 RAD51AP2Q09MP3 1159 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 SLC39A14Q15043 492 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 NOMO2Q5JPE7 1267 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 NT5DC1Q5TFE4 455 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 EEF1DP3Q658K8 133 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 KCNT2Q6UVM3 1135 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 ADGRD2Q7Z7M1 963 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 ZNF280BQ86YH2 543 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 ABI1Q8IZP0 508 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 KCTD17Q8N5Z5 321 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 BCL7CQ8WUZ0 217 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-212ENST00000590260 CCDC51Q96ER9 411 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 CCSER1Q9C0I3 900 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 PDZD7Q9H5P4 517 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 NRDE2Q9H7Z3 1164 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 PRMT7Q9NVM4 692 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-212ENST00000590260 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
DDX39A-212ENST00000590260 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 INPPL1O15357 1258 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 SLC26A4O43511 780 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 DDHD2O94830 711 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 NPTXRO95502 500 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 PRKCBP05771 671 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 ZSCAN22P10073 491 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 LAG3P18627 525 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 GTF2F1P35269 517 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■■■■■ 27.6
DDX39A-212ENST00000590260 PEX3P56589 373 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 ERVFC1P60507 584 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 CACNB1Q02641 598 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 HYAL1Q12794 435 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 PTPROQ16827 1216 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 SPOUT1Q5T280 376 aaKnown RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 ZBTB8OSQ8IWT0 167 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 SLC39A11Q8N1S5 342 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 GSTCDQ8NEC7 633 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 DEPTORQ8TB45 409 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 SYMPKQ92797 1274 aaKnown RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 PRIMPOLQ96LW4 560 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 C2orf40Q9H1Z8 148 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 CXCL16Q9H2A7 254 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 NSUN3Q9H649 340 aaKnown RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 RSAD1Q9HA92 442 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 ARHGAP28Q9P2N2 729 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 TFIP11Q9UBB9 837 aaKnown RBP20.13■□□□□ 0.81
DDX39A-212ENST00000590260 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
DDX39A-212ENST00000590260 A0A087X0B3 334 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 NT5C1B-RDH14C9J2C7 533 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 ACKR2O00590 384 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 SSBP05455 408 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX39A-212ENST00000590260 UBA7P41226 1012 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 BCAR1P56945 870 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 MCM6Q14566 821 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 PPP2R5AQ15172 486 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 SKIV2LQ15477 1246 aaKnown RBP20.12■□□□□ 0.81
DDX39A-212ENST00000590260 TIGD5Q53EQ6 642 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 SLC27A1Q6PCB7 646 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 GLB1LQ6UWU2 654 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 LINC00301Q8NCQ3 95 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 PGBD4Q96DM1 585 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms