RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 CCNB1P14635 433 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 BRAFP15056 766 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 GNAZP19086 355 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 CROCCP2Q86T23 111 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 SYT11Q9BT88 431 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 PIDD1Q9HB75 910 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 KLHL33A6NCF5 533 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 H0Y3Z8 333 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 PYGMP11217 842 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 TNFAIP3P21580 790 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 CHKAP35790 457 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 RAD23BP54727 409 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
MBD1-222ENST00000590208 ITPK1Q13572 414 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 RRP1BQ14684 758 aaKnown RBP16.95■□□□□ 0.3
MBD1-222ENST00000590208 KSR1Q8IVT5 923 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 GPR88Q9GZN0 384 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 CTTNBP2NLQ9P2B4 639 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
MBD1-222ENST00000590208 PDXKO00764 312 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
MBD1-222ENST00000590208 CTNNA2P26232 953 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 POLD1P28340 1107 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 STX2P32856 288 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 SLC20A1Q8WUM9 679 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 PWWP2AQ96N64 755 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 TRIM7Q9C029 511 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 MYLK2Q9H1R3 596 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■■■■ 27.2
MBD1-222ENST00000590208 PARP2Q9UGN5 583 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 KIF13BQ9NQT8 1826 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 TP73O15350 636 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 PEX11AO75192 247 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 SNUPNO95149 360 aaKnown RBP16.94■□□□□ 0.3
MBD1-222ENST00000590208 GCNT3O95395 438 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 TARSP26639 723 aaKnown RBP16.94■□□□□ 0.3
MBD1-222ENST00000590208 PCK1P35558 622 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 SLC16A2P36021 539 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 MESDQ14696 234 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 EPM2AIP1Q7L775 607 aaPredicted RBP16.94■□□□□ 0.3
MBD1-222ENST00000590208 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 SYNGAP1Q96PV0 1343 aa16.94■□□□□ 0.3
MBD1-222ENST00000590208 COILP38432 576 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 SYT15Q9BQS2 421 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ROPN1BQ9BZX4 212 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 ROPN1Q9HAT0 212 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 RNPEPL1Q9HAU8 725 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 HAO1Q9UJM8 370 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ANKRD62A6NC57 917 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 CETPP11597 493 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ALAS1P13196 640 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 PECAM1P16284 738 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 COMTP21964 271 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 SMARCA1P28370 1054 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 FOXN2P32314 431 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 KYNUQ16719 465 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 C16orf86Q6ZW13 317 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ZSWIM1Q9BR11 485 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 STK33Q9BYT3 514 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 METTL14Q9HCE5 456 aaKnown RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 ETAA1Q9NY74 926 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 LRRC42Q9Y546 428 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 ATMINO43313 823 aaPredicted RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 SMIM24O75264 130 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 BAG3O95817 575 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 TRIM49P0CI25 452 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 TRIM49CP0CI26 452 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 CALB2P22676 271 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 SLC30A9Q6PML9 568 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 SRRM1Q8IYB3 904 aaKnown RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 ERP27Q96DN0 273 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 BTBD6Q96KE9 485 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 RUNDC3BQ96NL0 473 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 PAIP2Q9BPZ3 127 aaKnown RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 RUSC1Q9BVN2 902 aa16.93■□□□□ 0.3
MBD1-222ENST00000590208 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
MBD1-222ENST00000590208 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 ANKRD33BA6NCL7 494 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 GNAT1P11488 350 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 BRD2P25440 801 aaKnown RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 CLK2P49760 499 aaKnown RBP16.92■□□□□ 0.3
MBD1-222ENST00000590208 COG2Q14746 738 aa16.92■□□□□ 0.3
MBD1-222ENST00000590208 RBBP5Q15291 538 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms