RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 FGFR4P22455 802 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 NAMPTP43490 491 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 DMP1Q13316 513 aaPredicted RBP23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 ZNF658Q5TYW1 1059 aaPredicted RBP23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 CATSPER4Q7RTX7 472 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 ZBTB8OSQ8IWT0 167 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 BSNDQ8WZ55 320 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 NFKBIZQ9BYH8 718 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 ZHX3Q9H4I2 956 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 GDAQ9Y2T3 454 aa23.41■■□□□ 1.34
R3HDM4-204ENST00000589428 INO80B-WBP1J3KQ70 363 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 AMHP03971 560 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 ZNF131P52739 623 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 STK4Q13043 487 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 IFNLR1Q8IU57 520 aaPredicted RBP23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 DEPTORQ8TB45 409 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 C2orf40Q9H1Z8 148 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 C17orf75Q9HAS0 396 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 MYH11P35749 1972 aa23.4■■□□□ 1.34
R3HDM4-204ENST00000589428 DENND3A2RUS2 1198 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 ATP2A2P16615 1042 aaKnown RBP23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 PCBP1Q15365 356 aaKnown RBP eCLIP23.39■■□□□ 1.343e-7■■■■□ 21.8
R3HDM4-204ENST00000589428 LRIT3Q3SXY7 679 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 HERC4Q5GLZ8 1057 aaPredicted RBP23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 SFR1Q86XK3 245 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 MYOCDQ8IZQ8 938 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 KIAA0895Q8NCT3 520 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 TMX1Q9H3N1 280 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 MINDY3Q9H8M7 445 aa23.39■■□□□ 1.34
R3HDM4-204ENST00000589428 SFI1A8K8P3 1242 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 ERLIN2O94905 339 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 FAM13AO94988 1023 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 ZSCAN20P17040 1043 aaPredicted RBP23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 DEFB103AP81534 67 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 FAM26FQ5R3K3 315 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 CDCA2Q69YH5 1023 aaPredicted RBP23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 MLKLQ8NB16 471 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 PHOSPHO2Q8TCD6 241 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 TSPYL2Q9H2G4 693 aaPredicted RBP23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 PARVGQ9HBI0 331 aa23.39■■□□□ 1.33
R3HDM4-204ENST00000589428 CCDC169A6NNP5 214 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 CD44P16070 742 aaKnown RBP23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 GAP43P17677 238 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 PEX3P56589 373 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 LINC01599Q8WXQ3 324 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 ADAM2Q99965 735 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 FGFBP2Q9BYJ0 223 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 SLC39A2Q9NP94 309 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 KCNG1Q9UIX4 513 aa23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 PIN4Q9Y237 131 aaKnown RBP23.38■■□□□ 1.33
R3HDM4-204ENST00000589428 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 MBTD1Q05BQ5 628 aa23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 PSMD2Q13200 908 aa23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 HABP4Q5JVS0 413 aaKnown RBP23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 GLIS3Q8NEA6 775 aa23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 TBC1D7Q9P0N9 293 aa23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 LARSQ9P2J5 1176 aaKnown RBP23.37■■□□□ 1.33
R3HDM4-204ENST00000589428 PPP1R3GB7ZBB8 358 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 ENPP3O14638 875 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 PLS3P13797 630 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 NPTX2P47972 431 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 NCBP1Q09161 790 aaKnown RBP23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 MYCT1Q8N699 235 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 KIFC3Q9BVG8 833 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 KMT5AQ9NQR1 393 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 CHST12Q9NRB3 414 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 OLFML3Q9NRN5 406 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 C1orf112Q9NSG2 853 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 AGPAT5Q9NUQ2 364 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 LAMA3Q16787 3333 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 MGEA5O60502 916 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 ZNF165P49910 485 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 EFNA5P52803 228 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 SMTNP53814 917 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 FIZ1Q96SL8 496 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 GTPBP4Q9BZE4 634 aaKnown RBP23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 RBSNQ9H1K0 784 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 PRMT7Q9NVM4 692 aaPredicted RBP23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 SEL1LQ9UBV2 794 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 MAPK8IP1Q9UQF2 711 aa23.36■■□□□ 1.33
R3HDM4-204ENST00000589428 CAVIN2O95810 425 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 PRCPP42785 496 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 DSC3Q14574 896 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 GSE1Q14687 1217 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 MAPK6Q16659 721 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 FAM109BQ6ICB4 259 aaPredicted RBP23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 HERC6Q8IVU3 1022 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 RNF214Q8ND24 703 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 FAM200AQ8TCP9 573 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 ZBED2Q9BTP6 218 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 RGS18Q9NS28 235 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 DACH1Q9UI36 760 aa23.35■■□□□ 1.33
R3HDM4-204ENST00000589428 PHLPP2Q6ZVD8 1323 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 ADGRA3Q8IWK6 1321 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 IBSPP21815 317 aaPredicted RBP23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 CASP5P51878 434 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 SMAD3P84022 425 aaKnown RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms