RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 MAN1B1Q9UKM7 699 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 EXOC7Q9UPT5 735 aa13.38□□□□□ -0.27
DNMT1-218ENST00000589294 CSDE1O75534 798 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 ERLIN2O94905 339 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 PRKCBP05771 671 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 CD52P31358 61 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 PPP1R2P41236 205 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 SNRPFP62306 86 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 NFX1Q12986 1120 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 PPIGQ13427 754 aaKnown RBP eCLIP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 AMHR2Q16671 573 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 ZPBP2Q6X784 338 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 TAS1R3Q7RTX0 852 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 MYOCDQ8IZQ8 938 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 SCFD1Q8WVM8 642 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 BADQ92934 168 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 MRPL4Q9BYD3 311 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
DNMT1-218ENST00000589294 IL23AQ9NPF7 189 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 UBE4BO95155 1302 aa13.37□□□□□ -0.27
DNMT1-218ENST00000589294 MYH11P35749 1972 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 A0A1B0GUA9 196 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 TSPAN1O60635 241 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 PIGRP01833 764 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 MYBP10242 640 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 CSF2RAP15509 400 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-218ENST00000589294 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
DNMT1-218ENST00000589294 CASP5P51878 434 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 FPGSQ05932 587 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 MAP4K3Q8IVH8 894 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 GUF1Q8N442 669 aaKnown RBP13.36□□□□□ -0.27
DNMT1-218ENST00000589294 KIAA0895Q8NCT3 520 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 DBF4BQ8NFT6 615 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 CCDC51Q96ER9 411 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
DNMT1-218ENST00000589294 FGFBP2Q9BYJ0 223 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 AGPAT5Q9NUQ2 364 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
DNMT1-218ENST00000589294 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 BIN1O00499 593 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 SYN1P17600 705 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 ARF4P18085 180 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 BMP6P22004 513 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 FGFR4P22455 802 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 HOXD13P35453 343 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 STIM1Q13586 685 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 IKBKEQ14164 716 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 KNOP1Q1ED39 458 aaKnown RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 ISM2Q6H9L7 571 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 SLFN12LQ6IEE8 588 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 NOTUMQ6P988 496 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 CNKSR3Q6P9H4 555 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 DEFB128Q7Z7B8 93 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 SYCP3Q8IZU3 236 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 MLKLQ8NB16 471 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 GLIS3Q8NEA6 775 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 VWCEQ96DN2 955 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 CGNQ9P2M7 1197 aaKnown RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 ZMYND8Q9ULU4 1186 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-218ENST00000589294 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
DNMT1-218ENST00000589294 ABHD14A-ACY1A0A1B0GW23 586 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 ENPP3O14638 875 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 N4BP3O15049 544 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 EFCAB14O75071 495 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 TOM1L1O75674 476 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 ACTN1P12814 892 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 PRCPP42785 496 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 LIG4P49917 911 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 NLRP12P59046 1061 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 KCNA1Q09470 495 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 DSC3Q14574 896 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 ATF7IP2Q5U623 682 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 TMEM174Q8WUU8 243 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 BICD1Q96G01 975 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-218ENST00000589294 TARS2Q9BW92 718 aaKnown RBP13.34□□□□□ -0.27
DNMT1-218ENST00000589294 GBP3Q9H0R5 595 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 TMX1Q9H3N1 280 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 PTPRHQ9HD43 1115 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 RGS18Q9NS28 235 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-218ENST00000589294 PIN4Q9Y237 131 aaKnown RBP13.34□□□□□ -0.27
DNMT1-218ENST00000589294 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
DNMT1-218ENST00000589294 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms