RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-208ENST00000588909 ALDH7A1P49419 539 aaKnown RBP28.63■■■□□ 2.17
TPGS2-208ENST00000588909 KRT17Q04695 432 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 RNASELQ05823 741 aaKnown RBP28.63■■■□□ 2.17
TPGS2-208ENST00000588909 PTGDRQ13258 359 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 TMC7Q7Z402 723 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 CDR2LQ86X02 465 aaPredicted RBP28.63■■■□□ 2.17
TPGS2-208ENST00000588909 GJD3Q8N144 294 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 PGBD4Q96DM1 585 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 TBC1D32Q96NH3 1257 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 NACC1Q96RE7 527 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 NRDE2Q9H7Z3 1164 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 POLD4Q9HCU8 107 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 DNAJB4Q9UDY4 337 aa28.63■■■□□ 2.17
TPGS2-208ENST00000588909 B4GALT5O43286 388 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 XRCC6P12956 609 aaKnown RBP eCLIP28.62■■■□□ 2.17
TPGS2-208ENST00000588909 RPA1P27694 616 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 CA8P35219 290 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 CCT6AP40227 531 aaKnown RBP28.62■■■□□ 2.17
TPGS2-208ENST00000588909 ZNF280BQ86YH2 543 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 SMG8Q8ND04 991 aaKnown RBP28.62■■■□□ 2.17
TPGS2-208ENST00000588909 MSLNLQ96KJ4 702 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 RNF39Q9H2S5 420 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 DBR1Q9UK59 544 aaKnown RBP28.62■■■□□ 2.17
TPGS2-208ENST00000588909 HES2Q9Y543 173 aa28.62■■■□□ 2.17
TPGS2-208ENST00000588909 LRRIQ4A6NIV6 560 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 AMHR2Q16671 573 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 DUSP6Q16828 381 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 LLGL2Q6P1M3 1020 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 MRPL10Q7Z7H8 261 aaKnown RBP28.61■■■□□ 2.17
TPGS2-208ENST00000588909 BCL7CQ8WUZ0 217 aaPredicted RBP28.61■■■□□ 2.17
TPGS2-208ENST00000588909 RSAD1Q9HA92 442 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 LRWD1Q9UFC0 647 aa28.61■■■□□ 2.17
TPGS2-208ENST00000588909 ARHGEF35A5YM69 484 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 PP2D1A8MPX8 630 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 POMCP01189 267 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 FXR2P51116 673 aaKnown RBP eCLIP28.6■■■□□ 2.17
TPGS2-208ENST00000588909 SMAD4Q13485 552 aaKnown RBP28.6■■■□□ 2.17
TPGS2-208ENST00000588909 PADI6Q6TGC4 694 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 APOL6Q9BWW8 343 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 FAM50BQ9Y247 325 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 KIF3AQ9Y496 699 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 IPPQ9Y573 584 aa28.6■■■□□ 2.17
TPGS2-208ENST00000588909 DDHD2O94830 711 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 ARF4P18085 180 aaPredicted RBP28.59■■■□□ 2.17
TPGS2-208ENST00000588909 SLC11A1P49279 550 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 ZP2Q05996 745 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 SMAD2Q15796 467 aaKnown RBP28.59■■■□□ 2.17
TPGS2-208ENST00000588909 IL17AQ16552 155 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 PDE12Q6L8Q7 609 aaKnown RBP28.59■■■□□ 2.17
TPGS2-208ENST00000588909 NOTUMQ6P988 496 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 IFNLR1Q8IU57 520 aaPredicted RBP28.59■■■□□ 2.17
TPGS2-208ENST00000588909 URGCPQ8TCY9 931 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 AUTS2Q8WXX7 1259 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 BSNDQ8WZ55 320 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 TMEM169Q96HH4 297 aa28.59■■■□□ 2.17
TPGS2-208ENST00000588909 GALTP07902 379 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 ITGA4P13612 1032 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 NCLP19338 710 aaKnown RBP28.58■■■□□ 2.17
TPGS2-208ENST00000588909 CDC25AP30304 524 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 POU5F1BQ06416 359 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 NCBP1Q09161 790 aaKnown RBP28.58■■■□□ 2.17
TPGS2-208ENST00000588909 HAUS3Q68CZ6 603 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 MCPH1Q8NEM0 835 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 SNX29Q8TEQ0 813 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 APOL5Q9BWW9 433 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 CSRNP2Q9H175 543 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 NGRNQ9NPE2 291 aaKnown RBP28.58■■■□□ 2.17
TPGS2-208ENST00000588909 KIAA1024Q9UPX6 916 aa28.58■■■□□ 2.17
TPGS2-208ENST00000588909 H3BQV1 296 aa28.57■■■□□ 2.16
TPGS2-208ENST00000588909 AXLP30530 894 aa28.57■■■□□ 2.16
TPGS2-208ENST00000588909 VPS52Q8N1B4 723 aa28.57■■■□□ 2.16
TPGS2-208ENST00000588909 IGSF21Q96ID5 467 aa28.57■■■□□ 2.16
TPGS2-208ENST00000588909 NXF3Q9H4D5 531 aaKnown RBP28.57■■■□□ 2.16
TPGS2-208ENST00000588909 DDX19AQ9NUU7 478 aaKnown RBP28.57■■■□□ 2.16
TPGS2-208ENST00000588909 USP20Q9Y2K6 914 aa28.57■■■□□ 2.16
TPGS2-208ENST00000588909 NPTXRO95502 500 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 LIG1P18858 919 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 MLH1P40692 756 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 SMC1AQ14683 1233 aaKnown RBP28.56■■■□□ 2.16
TPGS2-208ENST00000588909 ADHFE1Q8IWW8 467 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 SMRP1Q8NCR6 262 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 CDCA3Q99618 268 aaPredicted RBP28.56■■■□□ 2.16
TPGS2-208ENST00000588909 NFKBIZQ9BYH8 718 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 BHMT2Q9H2M3 363 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.56■■■□□ 2.16
TPGS2-208ENST00000588909 RAPGEFL1Q9UHV5 662 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 SMC3Q9UQE7 1217 aa28.56■■■□□ 2.16
TPGS2-208ENST00000588909 CNTNAP2Q9UHC6 1331 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 TTLL13PA6NNM8 815 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 CXCL14O95715 111 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 CYP11B2P19099 503 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 COASYQ13057 564 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 PCBP1Q15365 356 aaKnown RBP eCLIP28.55■■■□□ 2.16
TPGS2-208ENST00000588909 MRPL43Q8N983 215 aaKnown RBP28.55■■■□□ 2.16
TPGS2-208ENST00000588909 IGSF22Q8N9C0 903 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 ZFP42Q96MM3 310 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 FAM193BQ96PV7 902 aaPredicted RBP28.55■■■□□ 2.16
TPGS2-208ENST00000588909 GAD1Q99259 594 aa28.55■■■□□ 2.16
TPGS2-208ENST00000588909 TRIM6Q9C030 488 aaPredicted RBP28.55■■■□□ 2.16
TPGS2-208ENST00000588909 FAM86C2PA6NEL3 165 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms