RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SYCP3Q8IZU3 236 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 ADSSL1Q8N142 457 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 HPS3Q969F9 1004 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 GDAQ9Y2T3 454 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 CNTNAP2Q9UHC6 1331 aa18.63■□□□□ 0.57
SCAMP4-211ENST00000588907 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 HNRNPDLO14979 420 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 PRCPP42785 496 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 PAK2Q13177 524 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 PRPF4BQ13523 1007 aaKnown RBP18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 CATSPER4Q7RTX7 472 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 CCDC51Q96ER9 411 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 BICD1Q96G01 975 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 TSG101Q99816 390 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
SCAMP4-211ENST00000588907 PDXKO00764 312 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 TIMP1P01033 207 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 IQCF3P0C7M6 154 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 BMP6P22004 513 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 LIG4P49917 911 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 ZNF445P59923 1031 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 LRRC63Q05C16 580 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 PAK1Q13153 545 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 DPCR1Q3MIW9 517 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 ZC2HC1CQ53FD0 456 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 ISM2Q6H9L7 571 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 SLFN12LQ6IEE8 588 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 SMYD4Q8IYR2 804 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 APBB2Q92870 758 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 PRDM5Q9NQX1 630 aaPredicted RBP18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 CHST12Q9NRB3 414 aa18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 TYW1Q9NV66 732 aaKnown RBP18.61■□□□□ 0.57
SCAMP4-211ENST00000588907 N4BP3O15049 544 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 KIAA0391O15091 583 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 CALUO43852 315 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 EVI5O60447 810 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TOM1L1O75674 476 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 PRPF6O94906 941 aaKnown RBP18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 PFKMP08237 780 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 RAG1P15918 1043 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TMEM132AQ24JP5 1023 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 NOTUMQ6P988 496 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 LRSAM1Q6UWE0 723 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TAS1R3Q7RTX0 852 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TMEM199Q8N511 208 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TMEM174Q8WUU8 243 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 TMEM40Q8WWA1 233 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 ZNF668Q96K58 619 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 FUCA2Q9BTY2 467 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 FTHL17Q9BXU8 183 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 FGFBP2Q9BYJ0 223 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 GZF1Q9H116 711 aaPredicted RBP18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 MINDY3Q9H8M7 445 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 AGPAT5Q9NUQ2 364 aa18.6■□□□□ 0.57
SCAMP4-211ENST00000588907 PPP1R3GB7ZBB8 358 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 TSPAN1O60635 241 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 GHRP10912 638 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 CCNE1P24864 410 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 MYBPC2Q14324 1141 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 LPIN1Q14693 890 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 NFIL3Q16649 462 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 AMHR2Q16671 573 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 EDRF1Q3B7T1 1238 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 CENPPQ6IPU0 288 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 FAM228AQ86W67 206 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 C12orf56Q8IXR9 622 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 GLIS3Q8NEA6 775 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 P2RX5Q93086 422 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 ADPGKQ9BRR6 497 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 CDHR5Q9HBB8 845 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 RWDD2AQ9UIY3 292 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 MAPK8IP1Q9UQF2 711 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 TRAF3IP3Q9Y228 551 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 TNFSF13BQ9Y275 285 aa18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 NOC2LQ9Y3T9 749 aaKnown RBP18.59■□□□□ 0.57
SCAMP4-211ENST00000588907 GARTP22102 1010 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 RPL13P26373 211 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 KYAT1Q16773 422 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 MFSD5Q6N075 450 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 NELFCDQ8IXH7 590 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 NELFBQ8WX92 580 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 SEPT8Q92599 483 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 ACO2Q99798 780 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 BPIFA3Q9BQP9 254 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 IFIH1Q9BYX4 1025 aaKnown RBP18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 KCTD10Q9H3F6 313 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 ERVK-5Q9HDB9 667 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 PADI3Q9ULW8 664 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 ST3GAL5Q9UNP4 418 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 ALPK3Q96L96 1907 aa18.58■□□□□ 0.56
SCAMP4-211ENST00000588907 ZMYM2Q9UBW7 1377 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 A0A1B0GUA9 196 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 CLDN3O15551 220 aa18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 FGFR1OPO95684 399 aaKnown RBP18.57■□□□□ 0.56
SCAMP4-211ENST00000588907 CXCL10P02778 98 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms