RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 CST9Q5W186 159 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 XXYLT1Q8NBI6 393 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 RDH13Q8NBN7 331 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 MORC4Q8TE76 937 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SEPT1Q8WYJ6 367 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SYN2Q92777 582 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 JAKMIP2Q96AA8 810 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PCYT2Q99447 389 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 CBWD1Q9BRT8 395 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 NIFKQ9BYG3 293 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 AZI2Q9H6S1 392 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PLCB1Q9NQ66 1216 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PDLIM7Q9NR12 457 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 HSPBP1Q9NZL4 362 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 ARHGAP20Q9P2F6 1191 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 FHOD1Q9Y613 1164 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 TLL2Q9Y6L7 1015 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ANKRD63C9JTQ0 380 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 AKR1B10O60218 316 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 SERPING1P05155 500 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ZBTB48P10074 688 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ADORA2AP29274 412 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 RFC5P40937 340 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 KIF11P52732 1056 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 CYP27A1Q02318 531 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 SLC9C1Q4G0N8 1177 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TDRD12Q587J7 1177 aaKnown RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 DPY19L2P1Q6NXN4 242 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ARMCX2Q7L311 632 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 MAP4K3Q8IVH8 894 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 DHX37Q8IY37 1157 aaKnown RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ASAP3Q8TDY4 903 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TSC1Q92574 1164 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TMEM143Q96AN5 459 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 BICD1Q96G01 975 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 FAM167AQ96KS9 214 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 PARK7Q99497 189 aaKnown RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 GPR20Q99678 358 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 INTS2Q9H0H0 1204 aaKnown RBP9.55□□□□□ -0.88
SMAD4-206ENST00000588860 SIX2Q9NPC8 291 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 MORF4L1Q9UBU8 362 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TRIM10Q9UDY6 481 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 GUCA1BQ9UMX6 200 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 ADGRA3Q8IWK6 1321 aa9.55□□□□□ -0.88
SMAD4-206ENST00000588860 TULP1O00294 542 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 FANCGO15287 622 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 CTIFO43310 598 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 N4BP1O75113 896 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 LGR5O75473 907 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ABL1P00519 1130 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 TXNP10599 105 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 UCHL3P15374 230 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 MARK3P27448 753 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ABCD1P33897 745 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 PBX2P40425 430 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 VAMP7P51809 220 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ARID5AQ03989 594 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ENOX2Q16206 610 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ZNF792Q3KQV3 632 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 CBWD6Q4V339 395 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 CBWD3Q5JTY5 395 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 CBWD5Q5RIA9 395 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 CCDC122Q5T0U0 273 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 IQCEQ6IPM2 695 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 INTS8Q75QN2 995 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SLC35F6Q8N357 371 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 DEPTORQ8TB45 409 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SCFD2Q8WU76 684 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 TMEM174Q8WUU8 243 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SLC7A3Q8WY07 619 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 POMGNT1Q8WZA1 660 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 GLG1Q92896 1179 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 COPS5Q92905 334 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SAAL1Q96ER3 474 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SPATA33Q96N06 139 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SPAG5Q96R06 1193 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 NTPCRQ9BSD7 190 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 HAUS4Q9H6D7 363 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 DHX33Q9H6R0 707 aaKnown RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 L2HGDHQ9H9P8 463 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 MYO1AQ9UBC5 1043 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 KCNG1Q9UIX4 513 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 AJAP1Q9UKB5 411 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-206ENST00000588860 TFR2Q9UP52 801 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 PCDHA13Q9Y5I0 950 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 IVNS1ABPQ9Y6Y0 642 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 EMSYQ7Z589 1322 aa9.54□□□□□ -0.88
SMAD4-206ENST00000588860 SSU72P8A0A1W2PR75 194 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 LRRIQ4A6NIV6 560 aa9.53□□□□□ -0.88
SMAD4-206ENST00000588860 ZNF263O14978 683 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms