RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 NR0B2Q15466 257 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 PRR16Q569H4 304 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 PCGF5Q86SE9 256 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 STK11IPQ8N1F8 1099 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 OR2I1PQ8NGU4 316 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 AMNQ9BXJ7 453 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 MYLK2Q9H1R3 596 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 C14orf93Q9H972 538 aaKnown RBP9.24□□□□□ -0.93
VMP1-208ENST00000588617 SAGE1Q9NXZ1 904 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 PADI4Q9UM07 663 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 A0A087WV62 115 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 POM121BA6NF01 834 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 H3BUI4 141 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 PHGDHO43175 533 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 FRS3O43559 492 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 COL6A1P12109 1028 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 FSTP19883 344 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 TECP42680 631 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 ZP2Q05996 745 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 PPP3CAQ08209 521 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 BNIP3Q12983 259 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 CCDC38Q502W7 563 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 CD276Q5ZPR3 534 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 TLDC1Q6P9B6 456 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 RHOT1Q8IXI2 618 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 CLASRPQ8N2M8 674 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 PDZD8Q8NEN9 1154 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 CDC5LQ99459 802 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 AGO4Q9HCK5 861 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 INCENPQ9NQS7 918 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 RBM12Q9NTZ6 932 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 DBR1Q9UK59 544 aaKnown RBP9.23□□□□□ -0.93
VMP1-208ENST00000588617 PCDHGB2Q9Y5G2 931 aa9.23□□□□□ -0.93
VMP1-208ENST00000588617 A0A0A6YYJ9 748 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 LRRC14BA6NHZ5 514 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 FOXN3O00409 490 aaPredicted RBP9.22□□□□□ -0.93
VMP1-208ENST00000588617 NRP2O60462 931 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 HK3P52790 923 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 CCDC178Q5BJE1 867 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 LIX1LQ8IVB5 337 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 ARL8AQ96BM9 186 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 MTFMTQ96DP5 389 aaKnown RBP9.22□□□□□ -0.93
VMP1-208ENST00000588617 MISP3Q96FF7 219 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 HIST1H2AHQ96KK5 128 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 HIST1H2AJQ99878 128 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 PTPN18Q99952 460 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 PITHD1Q9GZP4 211 aaPredicted RBP9.22□□□□□ -0.93
VMP1-208ENST00000588617 ZNF287Q9HBT7 754 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.22□□□□□ -0.93
VMP1-208ENST00000588617 OGDHLQ9ULD0 1010 aa9.22□□□□□ -0.93
VMP1-208ENST00000588617 A0A1W2PPL8 197 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 FITM1A5D6W6 292 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 FAM171A2A8MVW0 826 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 F8W031 263 aaPredicted RBP9.21□□□□□ -0.94
VMP1-208ENST00000588617 EFEMP2O95967 443 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 DBHP09172 617 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 FURINP09958 794 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 SRGNP10124 158 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 MAN1A1P33908 653 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 ARL4AP40617 200 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 MAPK9P45984 424 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 NRG3P56975 720 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 ICA1Q05084 483 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 MGAT2Q10469 447 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 NOGQ13253 232 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 LVRNQ6Q4G3 990 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 FAM180AQ6UWF9 173 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 TMC6Q7Z403 805 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 GLB1L2Q8IW92 636 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 CCDC33Q8N5R6 958 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 C3orf20Q8ND61 904 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 IL31RAQ8NI17 732 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 WDR48Q8TAF3 677 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 NSUN6Q8TEA1 469 aaKnown RBP9.21□□□□□ -0.94
VMP1-208ENST00000588617 SLC35A4Q96G79 324 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 PNPLA8Q9NP80 782 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 LMBRD1Q9NUN5 540 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 GALNT8Q9NY28 637 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 DTLQ9NZJ0 730 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 PCDHA3Q9Y5H8 950 aa9.21□□□□□ -0.94
VMP1-208ENST00000588617 PRRT4C9JH25 899 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 PSPNO60542 156 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 ZBTB7AO95365 584 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 HSD3B1P14060 373 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 APEX1P27695 318 aaKnown RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 NKX6-1P78426 367 aaPredicted RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 PGBD2Q6P3X8 592 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 SYTL1Q8IYJ3 562 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 SH2D3CQ8N5H7 860 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 ZSCAN18Q8TBC5 510 aaPredicted RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 ANKS1AQ92625 1134 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 TOE1Q96GM8 510 aaKnown RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 CLPTM1LQ96KA5 538 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 MAGED2Q9UNF1 606 aaPredicted RBP9.2□□□□□ -0.94
VMP1-208ENST00000588617 USP19O94966 1318 aa9.2□□□□□ -0.94
VMP1-208ENST00000588617 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
VMP1-208ENST00000588617 SRGAP3O43295 1099 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms