RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TMEM119Q4V9L6 283 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 PDE12Q6L8Q7 609 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 GLB1LQ6UWU2 654 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 AGMOQ6ZNB7 445 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 POF1BQ8WVV4 589 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 BSNDQ8WZ55 320 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 PABPC5Q96DU9 382 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 TIPINQ9BVW5 301 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 UBE2ZQ9H832 354 aaPredicted RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 ALG13Q9NP73 1137 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 UBN1Q9NPG3 1134 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 VPS37CA5D8V6 355 aaPredicted RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 LRRIQ4A6NIV6 560 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 MEIS3P2A8K0S8 358 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 E9PMD0 336 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 DLL1O00548 723 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 BMP1P13497 986 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 PDIA4P13667 645 aaKnown RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 IBSPP21815 317 aaPredicted RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 GUCY2CP25092 1073 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 LONP1P36776 959 aaKnown RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 TFF2Q03403 129 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 PTPAQ15257 358 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 LEXMQ3ZCV2 418 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 RINT1Q6NUQ1 792 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 SLC27A1Q6PCB7 646 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 C1orf186Q6ZWK4 172 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 KCNK18Q7Z418 384 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 ZBTB8OSQ8IWT0 167 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 DAW1Q8N136 415 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 RNF169Q8NCN4 708 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 KCNN1Q92952 543 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 LPPQ93052 612 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 ZNF558Q96NG5 402 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 PNMA5Q96PV4 448 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 ZSCAN16Q9H4T2 348 aaPredicted RBP11.61□□□□□ -0.55
TPM4-209ENST00000588483 RSAD1Q9HA92 442 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 TLR9Q9NR96 1032 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 TBC1D13Q9NVG8 400 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 IPPQ9Y573 584 aa11.61□□□□□ -0.55
TPM4-209ENST00000588483 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 MYH15Q9Y2K3 1946 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 FSD2A1L4K1 749 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 ACKR2O00590 384 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 B4GALT5O43286 388 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 STX6O43752 255 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 EFNA5P52803 228 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 SLC12A3P55017 1021 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 HYAL1Q12794 435 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 MAPK7Q13164 816 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 MAPK6Q16659 721 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 SPOUT1Q5T280 376 aaKnown RBP11.6□□□□□ -0.55
TPM4-209ENST00000588483 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 THNSL1Q8IYQ7 743 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 SYT2Q8N9I0 419 aaPredicted RBP11.6□□□□□ -0.55
TPM4-209ENST00000588483 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 IFT74Q96LB3 600 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 DRC1Q96MC2 740 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
TPM4-209ENST00000588483 SPG21Q9NZD8 308 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 ARHGAP28Q9P2N2 729 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
TPM4-209ENST00000588483 MYH11P35749 1972 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 C5orf42Q9H799 3197 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 IRS1P35568 1242 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 LTBRP36941 435 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
TPM4-209ENST00000588483 BCAR1P56945 870 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 CABP7Q86V35 215 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 CPB2Q96IY4 423 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 CDCA3Q99618 268 aaPredicted RBP11.59□□□□□ -0.55
TPM4-209ENST00000588483 TMEM175Q9BSA9 504 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
TPM4-209ENST00000588483 RUSC1Q9BVN2 902 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 CCSER1Q9C0I3 900 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 NRDE2Q9H7Z3 1164 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
TPM4-209ENST00000588483 STK39Q9UEW8 545 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 PUF60Q9UHX1 559 aaKnown RBP11.59□□□□□ -0.55
TPM4-209ENST00000588483 KCNG1Q9UIX4 513 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 GIT1Q9Y2X7 761 aa11.59□□□□□ -0.55
TPM4-209ENST00000588483 TDRD15B5MCY1 1934 aaKnown RBP11.58□□□□□ -0.55
TPM4-209ENST00000588483 ARL5CA6NH57 179 aa11.58□□□□□ -0.56
TPM4-209ENST00000588483 N4BP3O15049 544 aa11.58□□□□□ -0.56
TPM4-209ENST00000588483 B4GALT3O60512 393 aa11.58□□□□□ -0.56
TPM4-209ENST00000588483 HIP1RO75146 1068 aa11.58□□□□□ -0.56
TPM4-209ENST00000588483 EDN1P05305 212 aa11.58□□□□□ -0.56
TPM4-209ENST00000588483 PRKCBP05771 671 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms