RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RSAD1Q9HA92 442 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 UBN1Q9NPG3 1134 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 DDX19AQ9NUU7 478 aaKnown RBP21.67■■□□□ 1.06
TPM4-208ENST00000588410 TBC1D13Q9NVG8 400 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 PCDHGC5Q9Y5F6 944 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 LOXHD1Q8IVV2 1947 aa21.67■■□□□ 1.06
TPM4-208ENST00000588410 GRXCR2A6NFK2 248 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 MEIS3P2A8K0S8 358 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 ITGA4P13612 1032 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 NCLP19338 710 aaKnown RBP21.66■■□□□ 1.06
TPM4-208ENST00000588410 ERVFC1P60507 584 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 ADAM15Q13444 863 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 BMS1Q14692 1282 aaKnown RBP21.66■■□□□ 1.06
TPM4-208ENST00000588410 ECM1Q16610 540 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 PLPP4Q5VZY2 271 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 AGMOQ6ZNB7 445 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 HACE1Q8IYU2 909 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 SLC39A11Q8N1S5 342 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 EFHBQ8N7U6 833 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 TMEM169Q96HH4 297 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 TCF25Q9BQ70 676 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 GBP3Q9H0R5 595 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 C2orf40Q9H1Z8 148 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 NGRNQ9NPE2 291 aaKnown RBP21.66■■□□□ 1.06
TPM4-208ENST00000588410 KANSL3Q9P2N6 904 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 DNM3Q9UQ16 869 aa21.66■■□□□ 1.06
TPM4-208ENST00000588410 WDR81Q562E7 1941 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 FSD2A1L4K1 749 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 NT5C1B-RDH14C9J2C7 533 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 FSCN2O14926 492 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 LINC01565O15544 149 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 LTBRP36941 435 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 ATP2C1P98194 919 aaPredicted RBP21.65■■□□□ 1.06
TPM4-208ENST00000588410 PPP2R5AQ15172 486 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 TMEM132AQ24JP5 1023 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 TMC7Q7Z402 723 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 FAM193BQ96PV7 902 aaPredicted RBP21.65■■□□□ 1.06
TPM4-208ENST00000588410 EIF2AQ9BY44 585 aaKnown RBP21.65■■□□□ 1.06
TPM4-208ENST00000588410 IPPQ9Y573 584 aa21.65■■□□□ 1.06
TPM4-208ENST00000588410 NLRC5Q86WI3 1866 aa21.64■■□□□ 1.06
TPM4-208ENST00000588410 PP2D1A8MPX8 630 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 IL9P15248 144 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 ARF4P18085 180 aaPredicted RBP21.64■■□□□ 1.05
TPM4-208ENST00000588410 ZRSR1Q15695 479 aaKnown RBP21.64■■□□□ 1.05
TPM4-208ENST00000588410 CLUL1Q15846 466 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 IL17AQ16552 155 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 AMHR2Q16671 573 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 SMG8Q8ND04 991 aaKnown RBP21.64■■□□□ 1.05
TPM4-208ENST00000588410 DEPTORQ8TB45 409 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 IFT74Q96LB3 600 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 CDCA3Q99618 268 aaPredicted RBP21.64■■□□□ 1.05
TPM4-208ENST00000588410 NRDE2Q9H7Z3 1164 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 PRMT7Q9NVM4 692 aaPredicted RBP21.64■■□□□ 1.05
TPM4-208ENST00000588410 VCANP13611 3396 aa21.64■■□□□ 1.05
TPM4-208ENST00000588410 PER2O15055 1255 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 B4GALT5O43286 388 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 PDCP20941 246 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 CA8P35219 290 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 DLX2Q07687 328 aaPredicted RBP21.63■■□□□ 1.05
TPM4-208ENST00000588410 CUL4AQ13619 759 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 SLC27A1Q6PCB7 646 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 KIFAP3Q92845 792 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 PRIMPOLQ96LW4 560 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 APOL6Q9BWW8 343 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 CD207Q9UJ71 328 aa21.63■■□□□ 1.05
TPM4-208ENST00000588410 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
TPM4-208ENST00000588410 VWA3AA6NCI4 1184 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 TBX10O75333 385 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 EYA4O95677 639 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 POMCP01189 267 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 SRGAP2BP0DMP2 458 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 LIG1P18858 919 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 CDC25AP30304 524 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 NAMPTP43490 491 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 SMC1AQ14683 1233 aaKnown RBP21.62■■□□□ 1.05
TPM4-208ENST00000588410 MAPK6Q16659 721 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 CDCA2Q69YH5 1023 aaPredicted RBP21.62■■□□□ 1.05
TPM4-208ENST00000588410 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 BRAPQ7Z569 592 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 BSNDQ8WZ55 320 aa21.62■■□□□ 1.05
TPM4-208ENST00000588410 SPTBN5Q9NRC6 3674 aaKnown RBP21.61■■□□□ 1.05
TPM4-208ENST00000588410 A0A1B0GUA9 196 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 E9PMD0 336 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 NPTXRO95502 500 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 GALTP07902 379 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 SSTR3P32745 418 aaPredicted RBP21.61■■□□□ 1.05
TPM4-208ENST00000588410 SMAD4Q13485 552 aaKnown RBP21.61■■□□□ 1.05
TPM4-208ENST00000588410 DUSP6Q16828 381 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 ARL6IP4Q66PJ3 421 aaKnown RBP21.61■■□□□ 1.05
TPM4-208ENST00000588410 CDR2LQ86X02 465 aaPredicted RBP21.61■■□□□ 1.05
TPM4-208ENST00000588410 ZNF280BQ86YH2 543 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 FAM178BQ8IXR5 827 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 TMEM87AQ8NBN3 555 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 IGSF21Q96ID5 467 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 CDK5RAP3Q96JB5 506 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 RNF39Q9H2S5 420 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 FZD8Q9H461 694 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 DNAJB4Q9UDY4 337 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 HES2Q9Y543 173 aa21.61■■□□□ 1.05
TPM4-208ENST00000588410 XIRP2A4UGR9 3374 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms