RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 TAS2R14Q9NYV8 317 aa17.71■□□□□ 0.43
RANBP3-209ENST00000587411 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
RANBP3-209ENST00000587411 ARFGEF1Q9Y6D6 1849 aa17.71■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L10C9JJH3 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 AKR1B1P15121 316 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 TTBK2Q6IQ55 1244 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 KRT35Q92764 455 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 CORO1CQ9ULV4 474 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L15C9J2P7 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L13C9JLJ4 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L11C9JVI0 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L18D6R9N7 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L22D6RA61 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L17D6RBQ6 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L19D6RCP7 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L20D6RJB6 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 SMNDC1O75940 238 aaKnown RBP eCLIP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 CCNB1P14635 433 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 GCKP35557 465 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 PDE6BP35913 854 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 EIF6P56537 245 aaKnown RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 ICA1Q05084 483 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 GABPAQ06546 454 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 CCDC15Q0P6D6 951 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L24Q0WX57 530 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 LRRC14Q15048 493 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 CAPRIN2Q6IMN6 1127 aaKnown RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 AADACL2Q6P093 401 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 VSTM1Q6UX27 236 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 DPP8Q6V1X1 898 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
RANBP3-209ENST00000587411 RAB3IPQ96QF0 476 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
RANBP3-209ENST00000587411 GAKO14976 1311 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 PEX5P50542 639 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 Q4G0T1 1027 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 C12orf50Q8NA57 414 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-209ENST00000587411 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 MGARPQ8TDB4 240 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 PRCCQ92733 491 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-209ENST00000587411 GRAMD1AQ96CP6 724 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 GGT7Q9UJ14 662 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 SBF2Q86WG5 1849 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 UBE4BO95155 1302 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 EYA4O95677 639 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 GPC5P78333 572 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 CDCA2Q69YH5 1023 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-209ENST00000587411 NAIF1Q69YI7 327 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-209ENST00000587411 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 FAM20AQ96MK3 541 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 RUSC1Q9BVN2 902 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 BHMT2Q9H2M3 363 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 CDC42EP4Q9H3Q1 356 aaKnown RBP17.69■□□□□ 0.42
RANBP3-209ENST00000587411 WHRNQ9P202 907 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 ZMYM2Q9UBW7 1377 aa17.69■□□□□ 0.42
RANBP3-209ENST00000587411 ECEL1O95672 775 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 SLC16A2P36021 539 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 CCNHP51946 323 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ARHGAP4P98171 946 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 MYL7Q01449 175 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 KCNA1Q09470 495 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 RRP1BQ14684 758 aaKnown RBP17.68■□□□□ 0.42
RANBP3-209ENST00000587411 LONRF1Q17RB8 773 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 CCDC25Q86WR0 208 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 SLC13A5Q86YT5 568 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ZDHHC14Q8IZN3 488 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 KIF2BQ8N4N8 673 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 FITM2Q8N6M3 262 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ADAM22Q9P0K1 906 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 KLHL14Q9P2G3 628 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 STK38LQ9Y2H1 464 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 FRMD4BQ9Y2L6 1034 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 MTA2O94776 668 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 MARCKSL1P49006 195 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ACVR2BQ13705 512 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 BLMHQ13867 455 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 PRR16Q569H4 304 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ANKRD20A2Q5SQ80 823 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ANKRD20A1Q5TYW2 823 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 ANKRD20A3Q5VUR7 823 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 PALB2Q86YC2 1186 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 SLCO2A1Q92959 643 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 POLR3CQ9BUI4 534 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-209ENST00000587411 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 RABGAP1Q9Y3P9 1069 aa17.68■□□□□ 0.42
RANBP3-209ENST00000587411 COL24A1Q17RW2 1714 aa17.67■□□□□ 0.42
RANBP3-209ENST00000587411 FAM13AO94988 1023 aa17.67■□□□□ 0.42
RANBP3-209ENST00000587411 FTLP02792 175 aaPredicted RBP17.67■□□□□ 0.42
RANBP3-209ENST00000587411 POTEJP0CG39 1038 aa17.67■□□□□ 0.42
RANBP3-209ENST00000587411 BCRP11274 1271 aa17.67■□□□□ 0.42
RANBP3-209ENST00000587411 CBWD6Q4V339 395 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms