RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NHEJ1Q9H9Q4 299 aaPredicted RBP21.63■■□□□ 1.05
TRIM47-204ENST00000587339 ADCY6O43306 1168 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 MMP3P08254 477 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 INSRRP14616 1297 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 UCHL3P15374 230 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 DLG4P78352 724 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 LAMTOR4Q0VGL1 99 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CCL14Q16627 93 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CBWD6Q4V339 395 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CBWD3Q5JTY5 395 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CBWD5Q5RIA9 395 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CBWD2Q8IUF1 395 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 CCDC170Q8IYT3 715 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 APBA2Q99767 749 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 PHLPP2Q6ZVD8 1323 aa21.63■■□□□ 1.05
TRIM47-204ENST00000587339 H3BRB1 525 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 TOMM70O94826 608 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 CYP2C19P33261 490 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 IGBP1P78318 339 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 DGKDQ16760 1214 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 KLHDC7AQ5VTJ3 777 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 OLFML2BQ68BL8 750 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 DPY19L2P1Q6NXN4 242 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 EFCAB12Q6NXP0 572 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 METTL13Q8N6R0 699 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 ACRBPQ8NEB7 543 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 ZNF592Q92610 1267 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 FBXL18Q96ME1 805 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 TUT1Q9H6E5 874 aaKnown RBP21.62■■□□□ 1.05
TRIM47-204ENST00000587339 SUCLA2Q9P2R7 463 aaPredicted RBP21.62■■□□□ 1.05
TRIM47-204ENST00000587339 GJD2Q9UKL4 321 aa21.62■■□□□ 1.05
TRIM47-204ENST00000587339 TUBB4AP04350 444 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 HOXD8P13378 290 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-204ENST00000587339 CYLC1P35663 651 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-204ENST00000587339 EFNA5P52803 228 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 MYL7Q01449 175 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 TRIM65Q6PJ69 517 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 GPD1LQ8N335 351 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 RNF149Q8NC42 400 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 SYN2Q92777 582 aaPredicted RBP21.61■■□□□ 1.05
TRIM47-204ENST00000587339 DOCK3Q8IZD9 2030 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 PIGRP01833 764 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 ADRB2P07550 413 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 SRGAP2CP0DJJ0 459 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 SFMBT2Q5VUG0 894 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 RHPN2Q8IUC4 686 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 CCDC42Q96M95 316 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 ARHGAP20Q9P2F6 1191 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 FBXL5Q9UKA1 691 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 USP20Q9Y2K6 914 aa21.61■■□□□ 1.05
TRIM47-204ENST00000587339 DYNC1LI2O43237 492 aaPredicted RBP21.6■■□□□ 1.05
TRIM47-204ENST00000587339 N4BP1O75113 896 aaKnown RBP21.6■■□□□ 1.05
TRIM47-204ENST00000587339 C22orf31O95567 290 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 ALDH1A1P00352 501 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 ZNF865P0CJ78 1059 aaPredicted RBP21.6■■□□□ 1.05
TRIM47-204ENST00000587339 CETN1Q12798 172 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 SLFN12LQ6IEE8 588 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 ZBTB8OSQ8IWT0 167 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 SPAG5Q96R06 1193 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 SIX2Q9NPC8 291 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 STYXL1Q9Y6J8 313 aa21.6■■□□□ 1.05
TRIM47-204ENST00000587339 IPO7O95373 1038 aaKnown RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 CLCN3P51790 818 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 ETF1P62495 437 aaKnown RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 PPP3CAQ08209 521 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 RAPGEF1Q13905 1077 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 CDCA2Q69YH5 1023 aaPredicted RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 USP37Q86T82 979 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 PLEKHO2Q8TD55 490 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 ZBTB10Q96DT7 871 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 FAM213AQ9BRX8 229 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 TARS2Q9BW92 718 aaKnown RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 KIAA1586Q9HCI6 787 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 LZTFL1Q9NQ48 299 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 GNEQ9Y223 722 aaKnown RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 FHOD1Q9Y613 1164 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 COL1A2P08123 1366 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 TULP1O00294 542 aaPredicted RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 KIAA0391O15091 583 aaKnown RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 P4HA2O15460 535 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 MAGEB2O15479 319 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 PLEKP08567 350 aaPredicted RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 KLRC1P26715 233 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 GCLMP48507 274 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 MCCD1P59942 119 aaPredicted RBP21.59■■□□□ 1.05
TRIM47-204ENST00000587339 KRT83P78385 493 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 NOGQ13253 232 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 TFDP1Q14186 410 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 KIF18AQ8NI77 898 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 PARD3BQ8TEW8 1205 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 CCDC127Q96BQ5 260 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 C2orf40Q9H1Z8 148 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 PAXBP1Q9Y5B6 917 aa21.59■■□□□ 1.05
TRIM47-204ENST00000587339 EIF3CLB5ME19 914 aaKnown RBP21.58■■□□□ 1.04
TRIM47-204ENST00000587339 CTGFP29279 349 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 SLC9C1Q4G0N8 1177 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 C1orf220Q5T0J3 134 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 SYT10Q6XYQ8 523 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 TLK2Q86UE8 772 aa21.58■■□□□ 1.04
TRIM47-204ENST00000587339 PRIMPOLQ96LW4 560 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms